Gene Information

Name : Shewmr4_3443 (Shewmr4_3443)
Accession : YP_735566.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 4115479 - 4116045 bp
Length : 567 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4061 polysulfide reductase, subunit B

DNA sequence : 
ATGACGAAAAGATATGTGATGGTGCACGATGAGAACAAGTGCATCGGCTGCCAAGCTTGTAACGTGGCCTGCCGCAGTGA
AAACGGTGTCCCCGAGGGCGTGACTCGCTTACAAGTGCGCGTAGAGGGCCCCTTCGGCGAGATGCCACACCTGCACTTTA
AGTACCACAGGGTATCGTGCCAGCAGTGTGAAGATGCGCCTTGTGTGAAGGTGTGTCCAACGGGGGCGGCCTATGTGGGT
GAGGATGGGATTGTCTCCATCCATGGCGATAAGTGTGTGGGCTGTATGTACTGCGTGGCGGCGTGCCCCTACAAGGTGCG
TTTTATGAATCCAGAAACCAAAGTGGCTGATAAGTGTAACTTCTGTAAGGACACGCGCTTAGCCCGAGGTGAAGAGCCCG
CCTGTGTGACTGTGTGTCCGACCGATGCCTTAGTCTTTGGCGATGCCAACGATCCACAGAGTGAGGTCGCTATGCTACTC
AACACTAAGATCACTTACCAAGATAAGACCCATTTAGGCACTCAGCCTAGGGTATATCGCGTTCCTACCAAAAGAGGGGG
GATTTGA

Protein sequence : 
MTKRYVMVHDENKCIGCQACNVACRSENGVPEGVTRLQVRVEGPFGEMPHLHFKYHRVSCQQCEDAPCVKVCPTGAAYVG
EDGIVSIHGDKCVGCMYCVAACPYKVRFMNPETKVADKCNFCKDTRLARGEEPACVTVCPTDALVFGDANDPQSEVAMLL
NTKITYQDKTHLGTQPRVYRVPTKRGGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-30 44
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-30 44
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-30 44
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-30 44
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_3443 YP_735566.1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein VFG0486 Protein 5e-31 44