Gene Information

Name : Shewmr4_3439 (Shewmr4_3439)
Accession : YP_735562.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 4111873 - 4113054 bp
Length : 1182 bp
Strand : -
Note : KEGG: son:SO4056 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes

DNA sequence :
ATGACCGCAGGCAAATTAGTGACCGAACGTCAATTAGCCACATTAGCAGTGCGTCAGGGTATCGAAAGCGATACTCAGCA
TGGCGCGGTGGTGCCGCCAATTTACCTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCTCGCGAATTTGATTACA
GTCGTTCCGGCAATCCTACCCGCAGCATCTTAGGTGATGCCTTAGCTAAGCTGGAAAAGGGCGCAACTGGCGTGGTGACT
TGCACTGGCATGGCAGCCATTACCTTAGTCACTACCTTGCTCGGCCCAGATGACTTGCTGGTGGTTCCACACGATTGTTA
CGGCGGTTCGTACCGTTTATTCACCAACCTCGCGAAAAAAGGCCAATTTAAACTGCTGGTGGTCGATCAAACCGATGCTC
AAGCGCTTGAGCAAGCCATCGCCCAGCAACCTAAGATGGTATGGATTGAAACCCCCTCTAACCCTCTGCTGCGAGTCGTC
GATATCGAAGCTATCGCCAAGGCGAGCCACGCAGTGGGCGCTTTAGTGGTAGTGGACAACACTTTCCTCTCGCCCATTTT
GCAGCAACCGCTGTTACTCGGTGCCGATATCGTTATCCACTCCACCACTAAGTACATCAATGGTCACAGCGATGTGGTGG
GCGGCGCGGTGATCGCCAAAGATCCTCAACTCGGTGAGACCTTACATTGGTGGTCGAACACTTTAGGTTTAACTGGGTCT
GCCTTCGACAGTTATCAAACCCTGCGGGGTCTGCGTACCTTAGCCGTGCGCATTCGCGAGCACCAAAGCAATGCCCAGCG
TATTCTGGACGTGCTGACGAGCAGCCCTGTGGTGAGCAAAGTGTATTACCCAGGACTTGCGGATCACCCCGGCCATGCCA
TTGCCGCCAAGCAGCAAAAAGGCTTTGGCGCTATGCTGAGTTTTGAGCTTAAGGGCGGCGAGGCCGAAGTGGTCGCCTTT
TTAGATGCCTTAAGTTTATTCAGCGTGGCCGAGAGCTTAGGTGGCGTTGAGAGTCTCGTGGCCGTGCCCGCGACTATGAC
CCATAGGGCGATGGAGCCCCAAGCGCGTTATGAAGCTGGCATTAAAGACACCCTATTACGTTTGTCGGTTGGTATTGAAG
ATGCCGACGACTTAGTTGCAGATATTCAAGCAGGATTGGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence :
MTAGKLVTERQLATLAVRQGIESDTQHGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRSILGDALAKLEKGATGVVT
CTGMAAITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLLVVDQTDAQALEQAIAQQPKMVWIETPSNPLLRVV
DIEAIAKASHAVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVIAKDPQLGETLHWWSNTLGLTGS
AFDSYQTLRGLRTLAVRIREHQSNAQRILDVLTSSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGEAEVVAF
LDALSLFSVAESLGGVESLVAVPATMTHRAMEPQARYEAGIKDTLLRLSVGIEDADDLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-62 41
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-61 41