Gene Information

Name : Shewmr4_3221 (Shewmr4_3221)
Accession : YP_735346.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3849190 - 3849594 bp
Length : 405 bp
Strand : +
Note : KEGG: son:SO3887 hypothetical protein

DNA sequence :
ATGAAAACCATTAATACCGACCTACCATTACCCGTGTCTCCTGTCTTTGCCAAAGCTCTGGCAGAACTCGTGAAAAATAT
TGATAGCAACGCTGTCACCATTAACTTTCGCGACCCCGATTACAGTCCACAAATAGGTGGCTTTCATCCTGTGGAAATCA
GGCTAGAGAAAGGTGCTGACCAATGGCAGTTATGCTACATCACCGACTTTTGCTATGTCGGCTACGCGGGACAATGGGAA
TTAGTGAAAGAGTTGGACTTTGACTTTAGCTGCGGCGTGTTTCAATCCATTAGTGGCTTGTTAGTCATTGAAGCGGCGGC
AGAGCTTTACCCCATTTGGGAGCAAAACTTCTTGTGTTACTGGCAGGAAATGGACGTTTTTAATGTCAGTATTTCGACAG
ACTAA

Protein sequence :
MKTINTDLPLPVSPVFAKALAELVKNIDSNAVTINFRDPDYSPQIGGFHPVEIRLEKGADQWQLCYITDFCYVGYAGQWE
LVKELDFDFSCGVFQSISGLLVIEAAAELYPIWEQNFLCYWQEMDVFNVSISTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1402 YP_001217345.1 hypothetical protein Not tested VPI-2 Protein 4e-13 42
VPI2_0036 ACA01851.1 hypothetical protein Not tested VPI-2 Protein 3e-13 42
VC1805 NP_231440.1 hypothetical protein Not tested VPI-2 Protein 4e-13 42
VC0508 NP_230159.1 hypothetical protein Not tested VSP-2 Protein 1e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_3221 YP_735346.1 hypothetical protein VFG1138 Protein 1e-13 42