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Name : Shewmr4_3204 (Shewmr4_3204) Accession : YP_735331.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3824791 - 3825630 bp Length : 840 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: son:SOA0129 transposase, IS3 family DNA sequence : GTGCGACAGTTGTGTCAGCTGTTTGATGTTCATCCGAGCGGGTATTACGCGTGGAGGGGCTGCGCAAAGTCGAAGCGACA ATGTAACAATGAACGACTTATAGGCCAACTCAAACAATGTTGGCTTGAGTCTTGTGGTGTCTATGGATACCGTAAACTCC ATCGAGATCTGCGTGATCTTGGCGAGCAATGCGGTATTAATCGTGTACATCGCCTGATGCAGCGAGCAGGACTGCGAGCG CAAGTTGGCTATCGCAAGCCTAGAACTCGTAGTGGTGAGCAGCATGTTGTAACGCCAAATCGCTTAGAACGGCAATTCAA CCCCTTAGCGCCGAACAAAGTGTGGGTGACGGATATTACGTACATCAAAACGCATGAAGGTTGGCTCTATCTTGGCGCTG TAATGGACTTGTTCTCACGTCGAATTATTGGTTGGTCAATGGGCCGTCGTATCACCAAAGAGCTTGCGTTATATGCTTTA TTAATGGCGGTATGGCGTCGTAAACCTGCTGGCAAAGTGTTGGTTCATTCAGATCAAGGAAGCCAATACACGAGCCATGA TTGGGGTGAGTTTCTAAGCGCTCATGGTTTGGAAGGTAGCATGAGCCGTCTAGGCAACAGCCATGATAACGCAGTAGCAG AGAGTTTCTTTCAACTGCTGAAACGTGAACGAATTAAGCGAAAAATCTATGCGATCAGGGACGACGCAAAGATGGATGTG TTTAATTATATTGAGATGTTTTACAACCCGAAACGACAGCATAGTTCCAATGATGGGCTATCACCGTTAGAGTATGAACG TCAGTATTTTAATGAGGCTAAAAGTCGTCTAGTGAAGTAG Protein sequence : MRQLCQLFDVHPSGYYAWRGCAKSKRQCNNERLIGQLKQCWLESCGVYGYRKLHRDLRDLGEQCGINRVHRLMQRAGLRA QVGYRKPRTRSGEQHVVTPNRLERQFNPLAPNKVWVTDITYIKTHEGWLYLGAVMDLFSRRIIGWSMGRRITKELALYAL LMAVWRRKPAGKVLVHSDQGSQYTSHDWGEFLSAHGLEGSMSRLGNSHDNAVAESFFQLLKRERIKRKIYAIRDDAKMDV FNYIEMFYNPKRQHSSNDGLSPLEYERQYFNEAKSRLVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | AAD44733.1 | TnpA | Not tested | SHI-2 | Protein | 2e-32 | 44 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-36 | 44 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-37 | 44 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 7e-29 | 43 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 7e-29 | 43 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 1e-41 | 41 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 1e-41 | 41 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 5e-42 | 41 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-41 | 41 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 1e-41 | 41 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-41 | 41 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 1e-41 | 41 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 2e-41 | 41 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 2e-26 | 41 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr4_3204 | YP_735331.1 | integrase catalytic subunit | VFG1484 | Protein | 4e-29 | 43 |
| Shewmr4_3204 | YP_735331.1 | integrase catalytic subunit | VFG1706 | Protein | 8e-42 | 41 |
