Gene Information

Name : Shewmr4_3160 (Shewmr4_3160)
Accession : YP_735288.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 3779739 - 3781139 bp
Length : 1401 bp
Strand : +
Note : TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cps:CPS_3995 ammonium transporter

DNA sequence :
ATGACCCAACAGACAACCGCACTTAACGCTAAGCTCCAGCACGGCACGAATACCCAAATCAGCCTGCACACTAAGCTCGC
TCAGCCAAACGCCCGTTATTCAAAATTGGGTTATCAGGCATTATTGGCGCTGTTCGCCAGCGGCTTTGCAGGCACGGCTT
TGGCCGATGAGGCGCAGCTCAGCGGCGCCAACACTGCCTGGATTTTAAGCTCATCTGCCCTAGTCCTATTGATGACACTC
CCAGGGCTGGCGCTGTTTTACGGCGGTCTGGTGCGCAGTAAAAACGTGCTATCGATTTTAATGCAGTGTTTTTCTATCGC
CGCTATCGCCTCCGTGCTGTGGTTTGTGGTGGGTTACTCTATCGCCTTCGATACCGGCAACGGTTTTATCGGCGGGCTTG
GCAAAGCTTTTCTAGCCAGCATTGGTCGCGATAGTGTCAGTGGGGATATTCCCGAACCTTTATTTATGCTTTTCCAAATG
ACCTTCGCGATTATCACGCCAGCGCTGATCATCGGTGGCTTTGCCGAGCGGATGAGATTCTCCGCTGTACTGATGTTTTC
AAGCGCTTGGTTGCTGTTAGTCTATGCACCTATCACCCACTGGGTGTGGGGCGGCGGCTGGTTGGCCGAGCTTGGCCTGT
ATGACTTTGCAGGCGGTACAGTCGTACACATTACTGCTGGGGTAGCGGCACTGGTGGCGGCAAAAGTGTTAGGGCCGCGT
AAGGGATTCTTAAACTCGGCCATTATGCCCCATAACTTGACCATGACAGTGACAGGCGCGGGCATGTTGTGGGTAGGCTG
GTTTGGCTTTAATGGCGGCAGCGCTTTAGGCGCCAATGGCACTGCGGCCATGGCGATTCTCGCGACCCATCTAGCCGCGT
CGATGGGCGCCATCACGTGGGCAGGTATCGAGTGGTATAAATTCGGTAAGGCCAGTGCACTCGGTATCGTCACCGGCATG
GTGGCAGGCCTTGGCACTATCACTCCTGCATCGGGTTATGTCGGCCCTGCTGGCGCGTTAGTTATCGGTTTTCTTGGCGG
CGTGGTCTGCTTCTTTTCAACTGTGTACATTAAACAAAAGCTTAAGATTGACGACTCACTCGATGTGTTCCCAGTGCACG
GTGTCGGCGGTATTCTCGGTACTTTGCTGGCGGGAGTATTTAGTTCGACTCAGCTTGGGATCTTCAGCGGTTATGGTTTT
GCCAGTGTCAACCACACTATGCTCGACCAACTCGGGGCGCAGGCCATTGGCGTTATCGCTACGTTCAGCTATACAGCGAT
TGTAACGTGGTTATTGTTTGTGGTGATTGGCAAAATCCTCGGTGGACTTCGCGTCAGCACAGAGCAGGAAGTGAATGGCC
TAGACCTTTCCGAACATGAAGAAACAGGCTATAGCCTGTAG

Protein sequence :
MTQQTTALNAKLQHGTNTQISLHTKLAQPNARYSKLGYQALLALFASGFAGTALADEAQLSGANTAWILSSSALVLLMTL
PGLALFYGGLVRSKNVLSILMQCFSIAAIASVLWFVVGYSIAFDTGNGFIGGLGKAFLASIGRDSVSGDIPEPLFMLFQM
TFAIITPALIIGGFAERMRFSAVLMFSSAWLLLVYAPITHWVWGGGWLAELGLYDFAGGTVVHITAGVAALVAAKVLGPR
KGFLNSAIMPHNLTMTVTGAGMLWVGWFGFNGGSALGANGTAAMAILATHLAASMGAITWAGIEWYKFGKASALGIVTGM
VAGLGTITPASGYVGPAGALVIGFLGGVVCFFSTVYIKQKLKIDDSLDVFPVHGVGGILGTLLAGVFSSTQLGIFSGYGF
ASVNHTMLDQLGAQAIGVIATFSYTAIVTWLLFVVIGKILGGLRVSTEQEVNGLDLSEHEETGYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 4e-83 54
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 4e-83 54