Gene Information

Name : glnA (Shewmr4_0305)
Accession : YP_732442.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 327853 - 329262 bp
Length : 1410 bp
Strand : -
Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra

DNA sequence :
ATGTCAGTTGAATCAGTTTTAAAGCAACTTGAAGAATTAGAAGTTAAGTTTGTTGATTTACGTTTTACCGACACCAAAGG
TAAAGAGCAGCACGTATCTATCCCTGCTCATCAGGTAGACGCTGACTTCTTCGAAGACGGCAAAATGTTTGACGGTTCGT
CAATCGCTGGCTGGAAAGGCATTAACGAATCAGACATGGTGCTGATGCCAGACCCAACCACGTTTGTATTAGACCCATTC
ACCGAAGAAACCACTGCCCTGATCCGCTGTGACATTCTCGAGCCAGGCACTATGACTGGTTATGACCGCGACCCACGTTC
TATCGCGAAAAAAGCGGAAGAATACTTACGCTCTACCGGTATCGCTGACACTGTATTAGTTGGACCAGAACCAGAATTCT
TCCTGTTCGACGACGTACGTTTCGGTACTGACATGTCTGGTTGTTTCGTGAAAATCGACGCTAAAGAAGCGGCATGGAAC
TCTGGCACTAGCTACGAAGGTGGTAACACTGGTCACCGTCCATTCGTGAAAGGCGGTTACTTCCCAGTAGCTCCAGTTGA
CTCATCACAAGACTTACGTAGCGCTATGTGTTTAGTGCTCGAAGAAATGGGTCAAGTCGTTGAAGCTCACCACCACGAAG
TAGCGACTGCGGGTCAAAACGAAATCGCAACTCGCTTCAACACTCTGACTAAGAAAGCGGACGAAATCCAAATTCTGAAG
TACGTAGTACACAACATGGCTCACGCCTACGGTAAGACTGCGACTTTCATGCCTAAGCCAATCGTTGGCGACAACGGTAG
CGGTATGCACGTTCACCAATCTCTGTCTAAAGACGGTGTGAACCTGTTCGCAGGCGACAAATACGCTGGTTTAAGTGAAA
CTGCACTGTACTACATCGGTGGTATCATCAAGCACGCTCGCGCGCTGAACGCTTTCACTAACCCAAGCACTAACTCTTAC
AAGCGTTTAGTACCACACTTCGAAGCGCCAGTGATGTTAGCTTACTCAGCACGTAACCGCAGCGCTTCAATCCGTATTCC
AGTGGTACCAAGCCCTAAAGGCCGTCGTATCGAAACTCGCTTCCCTGATCCACATGCAAACCCATACTTAGGTTTCGCAG
CACTGCTGATGGCGGGTCTCGACGGTATCCAAAACAAGATCCATCCTGGCGAAGCTATGGATAAAGACTTGTACGATCTG
CCAGCTGAAGAAGCGGCTGAAATCCCACAAGTAGCGACTTCATTAGAAAACGCGCTTGAAAACCTGCAAGCTGACCACGA
GTTCTTAACTCGCGGCGGTGTATTCAGCGAAGATTTCATCCAGTCTTACATTGCACTGAAATCTGCAGAAGCTGAGCGTG
TAAGCCGTACAACTCACCCATTAGAGTTCGAGATGTACTACAGCCTGTAA

Protein sequence :
MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPAHQVDADFFEDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPF
TEETTALIRCDILEPGTMTGYDRDPRSIAKKAEEYLRSTGIADTVLVGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWN
SGTSYEGGNTGHRPFVKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK
YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLSKDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSY
KRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIETRFPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDL
PAEEAAEIPQVATSLENALENLQADHEFLTRGGVFSEDFIQSYIALKSAEAERVSRTTHPLEFEMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_732442.1 glutamine synthetase VFG1399 Protein 4e-110 52