Gene Information

Name : Shewmr4_3029 (Shewmr4_3029)
Accession : YP_735157.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3622658 - 3624118 bp
Length : 1461 bp
Strand : -
Note : PFAM: Catalase domain protein; KEGG: son:SO1070 catalase

DNA sequence :
ATGAGTCAACAGTATTTAACAAGCCAAAGCGGTTCTCCAATTGCTGACGATCAAAACTCATTGTCAGCGGGTGAGCGTGG
TCCCTTACTACTGCAAGATTGGCATTTAATTGAAAAGCTTGCCCACTTTAACCGTGAGCGTATTCCTGAGCGTGTTGTGC
ATGCGAAAGGGACTGGCGTATACGGTACTTTCACCCTGACTAAAGACTTAAGCGAATACACCATCGCCGACCACTTTAAC
GGTGTGGGTAAGCAAACTGAGACCTTCGTGCGCTTCTCTACCGTGGGTGGTGAAATGGGCTCTGCCGATGCCGAGCGCGA
TCCCCGTGGTTTTGGTCTGCGCTTCTATACCGCCCGTGGTAACCACGATATCGTGGGTAACAACACGCCGACCTTCTTCC
TGCGTGATGGTATTAAGTTCCCAGACTTTATCCATACCCAAAAGCGTAACCCATTGACGAATTTGAAAGATCCACAAGCT
ATGTGGGACTTCTGGTCATTAAACCCTGAAGCCATGCACCAAGTGACGATTCTGATGTCTGACCGTGGTATTCCGGCAAA
CTACCGCCAAATGCATGGTTATGGTTCGCATACTTTCTCGTTCTGGAATGCTAAAGGTGAGCGTTTCTGGGTGAAGTTCC
ACTTCAAATCGCAGCAAGGCGTGGTGAACTTAACCAATGAGCAAGCCGATAAGTTAAAGGGTATCGACCCTGACTCATCC
CAGCGCGATATGGTGGTAGCTGTGACCGACGGTAACTTCCCTCGTTGGACGGTGAACGTACAGATTATGCCTGAGGCCGA
TGCCAACACTTACCATATCAACCCATTCGATTTAACTAAGGTGTGGCCACATGGCGATTACCCGTTAATTGAAATTGGTG
TGTTAGAGCTGAATCGTTTACCGCAAAACTACTTTGCCGAAGTCGAGCAAGTGGCATTAGCACCGAGCAACTTAGTACCA
GGTGTGGGCGCATCGCCCGACAAGATGTTGCAGGCGCGTTTATTCGCCTATGCCGATGCGCAGCGTTACCGAATTGGGGC
GAACTACAACCAGTTACCAGTCAACTGCCCACATGCGACTAAAGCCAACCATCACCAACGTGCGGGTGCCATGGCGGGAA
CACAATGCCCATACCACGGTAGTCAAACCGGTGGCGATGCCGCGGCTAACTATGGTCCAAACAGCACTGCGGGTGCTTTA
GTTGAACCGGCAAACTTTGCCGAGCCACCACTGCGTTTAGATGGCGAAGCGGCGCGTTACAGCCGTTACAATCAGGATGA
TTACACTCAGGCGGGTAATTTGTATCGCATCTTCAGCGAAGCCGAGAAGGCACGCTTAGTGGAAACGATTTCTGGCTCAC
TGCGTCAGGCAAGTGTAGAGGTACAGCAACGTATGCTGGCACATTTCCACAAAGCCGATGCTGATTACGGTCAACGTATC
CAAACTGCACTCGGGTTATAA

Protein sequence :
MSQQYLTSQSGSPIADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERVVHAKGTGVYGTFTLTKDLSEYTIADHFN
GVGKQTETFVRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPLTNLKDPQA
MWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSFWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGIDPDSS
QRDMVVAVTDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHGDYPLIEIGVLELNRLPQNYFAEVEQVALAPSNLVP
GVGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHATKANHHQRAGAMAGTQCPYHGSQTGGDAAANYGPNSTAGAL
VEPANFAEPPLRLDGEAARYSRYNQDDYTQAGNLYRIFSEAEKARLVETISGSLRQASVEVQQRMLAHFHKADADYGQRI
QTALGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-124 54
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 5e-100 48
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 5e-100 48
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 5e-100 48
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 5e-100 48
katA YP_005126717.1 catalase Not tested Not named Protein 2e-101 47