Gene Information

Name : lspA (Shewmr4_2956)
Accession : YP_735084.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 3530069 - 3530581 bp
Length : 513 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGCCATTAACTTGGAAAGACAGTGGCTTACGTTGGTATTGGGTAGTTGTATTGGTGTTTTTGGCCGATCAACTATCCAA
ACAATGGGTCTTAGCCAATTTTGATTTGTTCGAATCGGTGAAGTTATTACCTTTTTTTAATTTCACCTATGTACGTAACT
ATGGCGCCGCATTTAGCTTTTTAAGTGAAGCAGGCGGTTGGCAACGTTGGTTATTTACCTTAGTGGCTGTTGGTTTCAGT
ACCTTGTTGACTGTGTGGCTGCGCAAGCAATCGGCATCCCTCTGGAAGTTAAACTTGGCTTACACCTTAGTGATTGGTGG
CGCCCTAGGTAACTTAATCGATCGATTGATGCACGGTTTTGTGGTGGATTTTATCGATTTTTATTGGGGTAAGAGCCATT
ATCCCGCCTTTAATATCGCCGATTCCGCGATTTTTATCGGCGCAGTGCTGATCATTTGGGATTCGTTTTTTAACAGCAAA
TCCGAACAAGATAAAACCGAAGAGGTGAAGTAG

Protein sequence :
MPLTWKDSGLRWYWVVVLVFLADQLSKQWVLANFDLFESVKLLPFFNFTYVRNYGAAFSFLSEAGGWQRWLFTLVAVGFS
TLLTVWLRKQSASLWKLNLAYTLVIGGALGNLIDRLMHGFVVDFIDFYWGKSHYPAFNIADSAIFIGAVLIIWDSFFNSK
SEQDKTEEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-13 43
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-13 43
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-13 43
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 1e-17 42