Gene Information

Name : Shewmr4_2913 (Shewmr4_2913)
Accession : YP_735041.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : succinate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 3478901 - 3480349 bp
Length : 1449 bp
Strand : -
Note : KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
GTGTTGTTAAAAGACCCGAGTCTGCTGCGTCAGCAATGTTATATCAATGGTCAGTGGTGCGATGCACAGTCAAAAGAAAC
TGTCGCTATCGCCAATCCCGCGACGGGCGTGGTGATCGCCAGTGTCCCTGTGATGGGGCAAGCCGAAACTCAAGCGGCAA
TTGCGGCAGCCGAAGTGGCCTTGCCCGCATGGCGGGCGCTTACCGCAAAAGAGCGTGGTGCCAAGCTGCGCCGCTGGTTT
GAATTACTCAATGAAAACAGTGATGACTTAGCGCTAATGATGACCAGTGAGCAGGGTAAACCCCTCGCCGAAGCTAAGGG
AGAAGTCACCTACGCCGCCTCCTTTATCGAATGGTTCGCCGAAGAGGCGAAGCGCGTCTATGGCGATACGATTCCTGGGC
ATCAGGGCGATAAACGCATCATGGTGATCAAGCAGCCCGTGGGCGTGACTGCGGCCATTACTCCTTGGAACTTCCCTGCG
GCGATGATCACCCGCAAAGCCGCGCCAGCACTGGCGGCAGGTTGCACTATGGTGGTGAAACCTGCGCCGCAAACGCCTTT
TACCGCATTAGCCTTAGCCGTGCTTGCCGAGCGCGCCGGGATCCCTGCAGGAGTGTTCAGCGTGATCACTGGTGATGCTA
TCGGCATTGGTAATGAGATGTGTAGCAACCCAACTGTGCGTAAGTTGTCTTTCACTGGCTCGACCCAAGTGGGCATTAAG
TTAATGGAGCAATGCGCGCCGACTCTGAAAAAATTATCTTTAGAATTAGGCGGTAACGCGCCATTTATCGTATTCGACGA
TGCCAATATCGATGCGGCGGTTGAAGGCGCCATGATCGCTAAGTATCGCAATGCGGGGCAAACCTGTGTCTGTGCTAACC
GTATTTATGTTCAGGCGGGCGTGTATGACGAATTTGCCCGCAAGCTCAGTATTGCCGTGGGCAAATTAAAGGTGGGTGAG
GGGATTACTGAAGGCGTCACTACGGGCCCCCTCATTAATCGCGCGGCGGTCGAAAAAGTCCAGAGCCATCTTGAGGATGC
GCTCAGCAAAGGGGCATCGGTGGTTGCGGGAGGCAAGCCCCATAGCTTAGGTGGCAACTTCTTCGAGCCCACGGTACTGA
CACATGTCGATAGCAGTATGCGTGTCGCCCGTGAAGAAACCTTTGGCCCACTGGCGCCGCTGTTTAAGTTTACCGATGTG
GACGATGTGATTAAGCAAGCCAATGATACCGAGTTTGGCTTGGCGGCTTATTTTTATGGCCGTGATATCTCACTCGTGTG
GAAAGTGGCCGAGGCATTGGAATACGGCATGGTGGGCGTCAACACTGGGTTGATTTCCACCGAAGTCGCGCCGTTTGGCG
GAATGAAATCCTCAGGGCTTGGCCGAGAAGGCTCTAAGTTCGGCATCGAAGAATATTTAGAAATCAAATATATCTGTATG
TCTGTTTAA

Protein sequence :
MLLKDPSLLRQQCYINGQWCDAQSKETVAIANPATGVVIASVPVMGQAETQAAIAAAEVALPAWRALTAKERGAKLRRWF
ELLNENSDDLALMMTSEQGKPLAEAKGEVTYAASFIEWFAEEAKRVYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAVLAERAGIPAGVFSVITGDAIGIGNEMCSNPTVRKLSFTGSTQVGIK
LMEQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAGVYDEFARKLSIAVGKLKVGE
GITEGVTTGPLINRAAVEKVQSHLEDALSKGASVVAGGKPHSLGGNFFEPTVLTHVDSSMRVAREETFGPLAPLFKFTDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKFGIEEYLEIKYICM
SV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-147 66
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-78 41