Gene Information

Name : Shewmr4_0249 (Shewmr4_0249)
Accession : YP_732387.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 266356 - 267876 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase

DNA sequence : 
ATGATCTATGCTCAACCCGGAACCGCTGGTGCCATCGTTAACTTTAAAGAAAAATACGCCAACTTTATCGGTGGAAAATG
GGTCGCCCCAGTCAACGGCGAATACTTCGATAATCGCTCCCCCGTCAATGGTCAAAACTTCTGTAAAATTCCCCGCTCCG
ACTACCGCGATATTGAACTGGCGCTCGATGCTGCCCACGCCGCTAAGGACGCTTGGGGAAAAACCTCGGTCACCGAGCGT
GCGAATTTACTGCTGCGTATCGCCGATCGCGTTGAGCAAAATCTCGAATACTTAGCCGTTGCCGAAACCTGGGAAAACGG
TAAAGCGGTGCGCGAAACCCTCAACGCCGACTTGCCTCTGTTTGTCGACCACTTCCGTTACTTTGCCGGCTGCATTCGAG
CACAGGAAGGCAGCGCCGCGGACATCGATGGCAATACCGTCAGCTATCACTTCCCAGAGCCATTGGGTGTCGTCGGACAA
ATCATTCCGTGGAACTTCCCGCTGTTGATGGCTGCATGGAAAATCGCCCCTGCACTCGCCGCAGGCAACTGCGTGGTACT
CAAACCCGCCGAGCAAACGCCAGTATCTATCCTTGTACTACTCGAACTGATTGAAGATCTGCTGCCGCCCGGCATCCTCA
ACGTCGTCAACGGTTTTGGCGCCGAAGCGGGCCAAGCCCTCGCCACCAGCAAACGTATCGCTAAACTGGCCTTTACTGGC
TCCACCGAAGTCGGTTATCACATCTTAAAATGTGCCGCCGAATCACTGATCCCATCGACAGTCGAACTCGGCGGTAAATC
GCCTAACCTGTATTTCGCCGATGTGATGGACCACGAAGACGAGTATTTAGATAAGGCCGTCGAAGGCATGTTGCTGGCCT
TCTTCAACCAAGGTGAAGTCTGTACTTGCCCATCAAGGGTGTTAATCCAAGAATCGATTTACGATCGCTTCATCGAAAAA
GTGCTCGCCCGTGCGCAAACCATCAAGCAAGGCAACCCGCTGGATACCGCCACCCAAGTGGGCGCACAAGCCTCCCAAGA
ACAGTTCGATAAGATCTTAAGCTATCTCGCGATTGGTAAAGATGAAGGCGCGCAGGTGCTTTTAGGCGGCTCGCTTTGCC
AACTTGAAGGCGAGCAAAGCAAAGGCTATTACATCAGCCCAACGATCATGAAAGGCCATAATAAGATGCGGATTTTCCAA
GAGGAAATCTTCGGTCCGGTTATTTCGGTCACCACCTTCAAGGATGAGGCCGAAGCCTTGGCAATTGCCAACGATACCGA
ATACGGCCTTGGTGCGGGTGTATGGACGCGGGATATGAACCGTGCCCAGCGTCTAGGACGAGGCATTCAAGCGGGTCGCG
TTTGGATTAACTGCTACCACGCCTATCCTGCCCACGCTGCCTTTGGCGGTTATAAGAAGTCGGGTATCGGCCGTGAAACC
CACAAGATGATGCTCAATCACTATCAAAACACCAAAAACCTATTGGTGAGTTACGATATCAATCCGCTCGGGTTCTTCTA
A

Protein sequence : 
MIYAQPGTAGAIVNFKEKYANFIGGKWVAPVNGEYFDNRSPVNGQNFCKIPRSDYRDIELALDAAHAAKDAWGKTSVTER
ANLLLRIADRVEQNLEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPPGILNVVNGFGAEAGQALATSKRIAKLAFTG
STEVGYHILKCAAESLIPSTVELGGKSPNLYFADVMDHEDEYLDKAVEGMLLAFFNQGEVCTCPSRVLIQESIYDRFIEK
VLARAQTIKQGNPLDTATQVGAQASQEQFDKILSYLAIGKDEGAQVLLGGSLCQLEGEQSKGYYISPTIMKGHNKMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNRAQRLGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLNHYQNTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-159 71
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-169 69
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-169 69
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-169 69
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-168 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_0249 YP_732387.1 aldehyde dehydrogenase VFG0082 Protein 5e-160 71