Gene Information

Name : Shewmr4_2526 (Shewmr4_2526)
Accession : YP_734654.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Resistance
Product : streptogramin A acetyl transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 3008528 - 3009031 bp
Length : 504 bp
Strand : +
Note : KEGG: son:SO1763 streptogramin A acetyl transferase

DNA sequence : 
GTGCTTTATCACTTTGACTTTATTGGCGATAAGCTGATTATTGGTAAATTTTGTGCCATTGCACGGGACGTTAAGTTCAT
TATGAATGGCGCCAATCATCAGGTATCGGGCTTTTCCACTTATCCCTTTTATATCTTCGGCAATGGCTGGGAGAAGGCAA
CACCTAAGCCCGAGGATTTACCCTTTAAGGGCGACACCCGCATTGGCCATGATGTGTGGATAGGCTATAACGCCACCATT
ATGCCCGGCGTCAACGTCGGCCACGGCGCCATTATCGCCAGCCAATCCGTGGTCACTAAGGATGTGCCGCCCTATGCCAT
CGTCGGCGGTAACCCTGCGACTGTGATTAAGTTGCGATTCGAGCCCGAGGTAATACACAAGCTACTCACCATTGCGTGGT
GGGATTGGCCGATTGAGAAAATCAGCGAGCATCTACCTGCCATTGTGGGCGCCGATCTTAGCCAATTAGCCCGCTTAGCG
GATGAAATACACACGCAGCCGTAA

Protein sequence : 
MLYHFDFIGDKLIIGKFCAIARDVKFIMNGANHQVSGFSTYPFYIFGNGWEKATPKPEDLPFKGDTRIGHDVWIGYNATI
MPGVNVGHGAIIASQSVVTKDVPPYAIVGGNPATVIKLRFEPEVIHKLLTIAWWDWPIEKISEHLPAIVGADLSQLARLA
DEIHTQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-28 46
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 4e-28 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 4e-28 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase AM180355.1.gene2499. Protein 3e-37 50
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase NC_002516.2.878374.p Protein 5e-28 48
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase AY123251.gene2.p01 Protein 3e-28 46
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase AY740681.1.gene5.p01 Protein 2e-28 45
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase AF322577.2.gene4.p01 Protein 2e-28 45
Shewmr4_2526 YP_734654.1 streptogramin A acetyl transferase JF268688.1.gene6.p01 Protein 4e-28 42