Gene Information

Name : Shewmr4_2396 (Shewmr4_2396)
Accession : YP_734524.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-[acyl-carrier-protein] reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.1.1.100
Position : 2856771 - 2857517 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: son:SO2776 3-oxoacyl-[acyl-carrier protein] reductase

DNA sequence : 
ATGAGTATCAATCTGAGTTTAGCGGGCAAAGTTGCCTTAGTGACAGGCGCGAGCCGTGGTATTGGCCGTGCGATTGCCGA
AACCTTAGTCGAAGCTGGTGCGATTGTGGTAGGAACTGCCACAAGTGAGAAGGGCGCCGCAGCAATTCAAGAATATCTGG
GTGACAAAGGTTTTGGTTTAGTGCTTAATGTTACCGATAGTCAATCCGTCACCGATTTATTCGATTCGATCAAAGAAAAA
GCGGGTGATGTTGATATTCTAGTCAACAACGCGGGTATCACCCGTGATAACTTGCTGATGCGAATGAAAGATGATGAATG
GAACGATATCATCGATACCAACCTGACATCATTGTTCAGACTATCAAAACCTGTAATGCGTACCATGATGAAAAAGCGTT
TTGGCCGGATCATCAATATCGGTTCTGTGGTAGGCACTATGGGCAATGCAGGTCAAGTTAACTACTCGGCAGCAAAGGCT
GGTTTAATCGGATTTACAAAATCTCTTGCAAGAGAGGTTGCATCTCGTCAAATTACAGTTAATGCTATCGCTCCTGGATT
TATCCAGACCGATATGACTGATGAGCTGACCGAAGATCAGCAAAAAGCTATCATGTCTCAGGTTCCGATGGAACGATTAG
GGCAAGCGCAAGAAATTGCCAATGCAGTGCTCTTTTTGGCGTCGGATTCTGCCGCTTATATCACAGGCGAGACTTTGCAT
GTGAATGGCGGAATGTACATGGTTTAA

Protein sequence : 
MSINLSLAGKVALVTGASRGIGRAIAETLVEAGAIVVGTATSEKGAAAIQEYLGDKGFGLVLNVTDSQSVTDLFDSIKEK
AGDVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKPVMRTMMKKRFGRIINIGSVVGTMGNAGQVNYSAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTEDQQKAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-35 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 9e-36 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-36 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-36 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-36 44