Gene Information

Name : Shewmr4_0187 (Shewmr4_0187)
Accession : YP_732325.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : transcription antitermination protein nusG
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 212935 - 213486 bp
Length : 552 bp
Strand : +
Note : KEGG: son:SO0219 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) d

DNA sequence : 
ATGACTGAAGCTAAAGAAGCTAAAAAAAGATGGTATGTAGTGCAGGCATTCTCTGGCTATGAAGGCCGAGTTTGTAAGTC
ACTGATTGAATACATTAAAATGCATGGCATGGAGCAATACTTCGGTGAAGTATTAGTTCCGACTGAAGAAGTCATTGAAA
TGCGTGCAGGCCAGCGTCGTAAGAGCGAGCGTAAGTTTTTCCCTGGCTATGTGTTAGTCCAGATGGAAATGAACGATGAC
AGCTGGCATTTAGTCAAAAGCATCCCGCGTGTTTTAGGCTTTATTGGCGGAACTTCTGATCGTCCTGCTCCAATTTCAGA
TAGAGAAGCGGATGCAATTCTGCGTCGCTTACAAGAAACCACAGCTTCACCGACTCACCGTGTTATTTTCGAGCCGGGCG
AAGTGGTGCGTGTTTGTGATGGTCCATTTGCTGACTTTAACGGTACCGTTGAAGAAGTGGATTATGACAAGAGCCGCGTA
AAAGTGTCGGTAATGATCTTTGGTCGTTCTACACCGGTTGAGCTCGATTTTAGTCAAGTCGAAAAAGGCTGA

Protein sequence : 
MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFSQVEKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 1e-54 62
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 1e-54 62