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Name : Shewmr4_1881 (Shewmr4_1881) Accession : YP_734012.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2239597 - 2241759 bp Length : 2163 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCCAGTTTAGAATCGTCCTCAGAATCGATTGCCGTTAATGCCCAAGGGCAAACGAGCCGCCGTGCGGCGCGCGCCCA GGCGCAAGCCTTTATCGATACCCTTAAACCATTACAACACCCTAATTCGCAAAAGTTATATTTGCAGGGAAGCCGTGAGG ATCTCCGTGTAGGGATGCGGCAAATTCTGCAAACCGATACACGGATTGGCGGCACTGCGACCGCGCCCATAGTCGAGAAA AACCCTCCCATTCCTGTGTATGACTGCGCCGGTCCTTATTCCGATCCGGCTGCGCAAATTAACGTGCGCCAAGGCTTAGC CAAACTCAGATTACCTTGGATTATCGAGCGCCAAGATACCGAAGTGCTTGATTGTGCAACCTCAGATTTTACCCAGCAAC GCCTCAAGGATGATGGGCTCGATCATCTGCGTTTCGAAGCCGGCTCAAGTGCGATTGTTCGTCCTCGCCGTGCCTTACCG GGTAAACGCGTGAGCCAATTACACTATGCCCGCCAAGGGATTATTACCCCTGAAATGGAATATGTTGCGATTCGAGAAAA TATGGCGCTCGCCGAGGTGCAAGATGAAATCTTAAACCGCCGTGGCCAAGGTGAATCCTTCGGCGCTGTGATTGGTAAAC CGATTACCCCAGAGTTTGTCCGCGATGAAATTGCCCGTGGCCGCGCGATTATTCCGTTAAATATCAATCATCCAGAAGCC GAGCCTATGATTATTGGTCGTAACTTCTTAGTGAAAGTGAATGCCAATATCGGTAACTCGGCGGTCACGTCCTCCATCGA GGAGGAAGTCGAAAAGCTAGTCTGGTCAACCCGTTGGGGCGCAGACACTGTGATGGACTTGTCCACTGGGCGCTATATCC ATGAAACCCGCGAATGGATCATCCGCAACTCGCCAGTGCCTATTGGCACAGTGCCGATTTATCAAGCACTTGAAAAAGTG AATGGGGTTGCAGAACACCTGACCTGGGAAGTATTTCGCGATACCTTGATTGAGCAAGCGGAGCAGGGCGTCGATTACTT CACCATCCACGCGGGCGTGTTATTGCGCTATGTACCCATGACCGCCAAACGGGTGACTGGAATTGTGTCCCGCGGCGGCT CGATTATGGCTAAATGGTGCTTGAGCCACCATCAAGAAAACTTCCTCTATACCCATTTTCGTGAGATTTGCGAGCTGTGC GTGGCCTACGATGTGTCGCTGTCATTAGGCGATGGTATGCGTCCAGGCTCGATTGCCGATGCCAATGATGAGGCGCAGTT TGCCGAGCTTGAGACCTTAGGCGAGTTGGTCAAAATCGCTTGGGAATACGATGTGCAGACCATTATCGAAGGGCCTGGAC ATATCCCGATGCAACTTATCAAAGAGAATATGGATAAGCAGCTTATTCACTGTGCCGAGGCGCCGTTTTATACTCTAGGT CCACAAATTACTGATATTGCGCCGGGTTACGATCACTTCACCTCTGGGATAGGTGCGGCGATGATCGCATGGTATGGCTG CGCCATGCTCTGCTATGTGACGCCGAAAGAACACTTAGGTTTGCCCAATAAGCAGGACGTCAAACAAGGGCTGATTGCCT ACAAGATTGCCGCCCATGCCGCCGATATTGCTAAGGGCCACCCAGGCGCGCAGATCCGCGACAATGCATTATCCAAGGCG CGTTTTGAATTCCGTTGGGAAGACCAATATAACCTGGGACTCGACCCTGATACCGCCCGAGCCTATCACGATGAATCTCT GCCACAGGAGTCGGCCAAGGTTGCGCACTTTTGCTCTATGTGTGGCCCAAAGTTCTGCTCGATGAAGATCACCCAAGATG TGCGCGACTATGCGGCAAGTTTAGCGGCGGGTACGTTGTCAGTGGCTTCGTCAAGCCAAAATGTTGAGAGCGCTGAAGCG CTTGCATCGATAAACCCTGCTCAACAAGGGCAATCAAACACTGAGGCACTCCAGCAAATCAGAGTCAAAACCCAAGATGA ATTAGCGGCGGCCATGGCGCAAAAATCGGCCGAGTTTGCGGCTTCCGGCGCCAAACTGTATCTGCCGCTGGGCGATGCTA ATACAGCAAATACAGCCAACGAATCGGCCAAGCAGCAGGATGGGACAGAGCTCAGACCGACAGCACAGGTTGCGGAGGTT TGA Protein sequence : MSSLESSSESIAVNAQGQTSRRAARAQAQAFIDTLKPLQHPNSQKLYLQGSREDLRVGMRQILQTDTRIGGTATAPIVEK NPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDTEVLDCATSDFTQQRLKDDGLDHLRFEAGSSAIVRPRRALP GKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEILNRRGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEA EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKV NGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELC VAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKA RFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLAAGTLSVASSSQNVESAEA LASINPAQQGQSNTEALQQIRVKTQDELAAAMAQKSAEFAASGAKLYLPLGDANTANTANESAKQQDGTELRPTAQVAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 71 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 71 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
