Gene Information

Name : Shewmr4_1780 (Shewmr4_1780)
Accession : YP_733911.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : IS4 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2114613 - 2115536 bp
Length : 924 bp
Strand : -
Note : PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase

DNA sequence :
GTGTCAAAGCCTCGTTATAACACAACCAACTGGAAGCAATACAACCAAGCCTTAATCAACCGCGGTTCACTTACCTTCTG
GATTGATGAGGATGCAATTGCTAAGTGGAAAGCCAAGGTCGAGCCGCCCAAGAAAGGTCGCCCTCAATTATTTAGCGACT
TAGCCATTACCACTGCGTTGATGGTTAAGCGTATTTTCTCTATGCCACTGAGAGCCTTACAGGGCTTTATCAATTCGGTG
TTTAAACTGGGTGACATCCCATTATCTTGCCCGCATTACACCTGTATCAGTAAACGCGCGAAAACGGTCAATATTGCTTT
TAAAACCAAGACTCGCGGCGCCATTGAGCACTTAGCTATCGACTCGACAGGCTTGAAGGTCTATGGCGAAGCTGAGTGGA
AAGTGAAGAAACACGGCACAGATGGAAAGCGCAGAGTGTGGCGTAAACTGCATATTGCCGTAGATACACATAGCCATGAA
ATTATTGCCGCAGAACTCAGTTTATCAGGTGTAACAGACGCTGAAGTGATGCCCAATTTACTTAAGCAAACCCATCGAAA
AATCCGTAATATCTCGGGTGATGGTGCTTACGACACGAAAGCTTGTCACGAAGCCGTTCGTCGAAAACACGCTTTAGTGC
TTATTCCTCCTAGGGAAGGTGCTGCGCTATGGGAACAAGGGCATCCACGAAACTTAGCCGTCAGTTGGCAACAGCTTCAT
GGCTCAAATAAGCAATGGAAAAAACGGTATGGTTATCATCGCCGCTCAATCTCAGAAACCGCAATGTACAGGATAAAACA
ACTGCTAGGAGGCACGTTGAGCATGCGGAATTATAACGCTCAGGTGGGAGAAGCTTACGCGATGATTAGGGCTTTGAACA
AACTCACTGGGCTAGGTATGCCTGAAACCCACTATATAGCTTGA

Protein sequence :
MSKPRYNTTNWKQYNQALINRGSLTFWIDEDAIAKWKAKVEPPKKGRPQLFSDLAITTALMVKRIFSMPLRALQGFINSV
FKLGDIPLSCPHYTCISKRAKTVNIAFKTKTRGAIEHLAIDSTGLKVYGEAEWKVKKHGTDGKRRVWRKLHIAVDTHSHE
IIAAELSLSGVTDAEVMPNLLKQTHRKIRNISGDGAYDTKACHEAVRRKHALVLIPPREGAALWEQGHPRNLAVSWQQLH
GSNKQWKKRYGYHRRSISETAMYRIKQLLGGTLSMRNYNAQVGEAYAMIRALNKLTGLGMPETHYIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG31792.1 unknown Not tested VPI Protein 7e-118 79