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Name : Shewmr4_1686 (Shewmr4_1686) Accession : YP_733819.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1999986 - 2001221 bp Length : 1236 bp Strand : + Note : PFAM: phage integrase family protein; KEGG: vvy:VV2262 phage integrase DNA sequence : ATGGGAAGGAGTACAAATAAGCTGACTGCAAAAGCGGTGCTCAATGCTAAAGCGGAAGCAAAGCCCTATAGATTGTCAGA TGGTGGCAATCTCTATCTCTATGTGCGTACTGCAGGGAAAACTTGGGAATTTAGATACATACGTCCCTCCACCAGCAAAC CCACCTATTTTGGTTTAGGCTCATATCCTGACGTATCCTTAGCTGAGGCGCGAGATAAAGCGCTAGAAGCGCGAAAAAAC TTGGCCGAAGGCATCGACCCTCAATTACTTAAAGTTGAAAACAAATTAAAAGCGGCAACAGAGAACGCTCAAACTCTCAA GCATATTGCGCAAATGTGGATGGACTCTAAGCAGGGAAGCATTAAGCCTAAAACCATCGAAGGCAATTGGCGTAAGCTTG AGCTGTATGCCTTCCCTAAACTGGGGAGTATTGCGATTAGCAGACTCACGGCTCCCATAGCCATTGCCGCGCTAAAGCCC CTAGAGCAGAAGGGGCATCTTGAAACGGTTAAGCGTACCGCTCAGTTGCTGAATGAAATCATGAACTTTTCAGTTAACTC TGGTTACATTCATGCTAATCCGTTGTCAGGTATTCGAGAAGTTTTTAGAAAGAGCAAAGTAGAACATCTGAAAGCATTAA AACCAGCAGAGCTAGCTGAGTTGCTGCAGACTATTGCAAACGCCAATTTATTGTTAACGACCCGGTGTTTGATTGAATGG CAATTGCACACAATGACCAGGCCAAATGAAGCGGCCGGAGCCCGTTGGGAAGAAATCGATTTTGATGCCAAACTTTGGAC TATTCCTGAATCACGCATGAAAATGAATCGTGAGCATATTATCCCGCTTACAGAGCATACCCTCGCGATACTCGAAACTG TTAAGCCGATTAGTGAACAGAGCCAATTTGTCTTTCCATCATCTAAAGATCCTCAAAAGCACACAGATCCTGAAACCATT AACAAAGCATTAGGGCGCATGGGATTAAAGGGAAGAACAACGGGTCATGGTTTACGCTCGCTTGCGAGCACTACCTTAAA CGAGCAAGGCTTTGATGGTGATGTTATTGAGGCAGCGTTAGCCCATGTTGATAAAAACCAAATCCGCAGTGCCTATAATC GCACGACCTACCTAGAGCGACGGACCAAGTTAATGGAGTGGTGGAGCAACCATATTGCCACTGCAGCAGTGGGCTCTTTG TCAGTAACAGCTAGTTCAAGAAAATTAGGGGCATGA Protein sequence : MGRSTNKLTAKAVLNAKAEAKPYRLSDGGNLYLYVRTAGKTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKALEARKN LAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKPKTIEGNWRKLELYAFPKLGSIAISRLTAPIAIAALKP LEQKGHLETVKRTAQLLNEIMNFSVNSGYIHANPLSGIREVFRKSKVEHLKALKPAELAELLQTIANANLLLTTRCLIEW QLHTMTRPNEAAGARWEEIDFDAKLWTIPESRMKMNREHIIPLTEHTLAILETVKPISEQSQFVFPSSKDPQKHTDPETI NKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHVDKNQIRSAYNRTTYLERRTKLMEWWSNHIATAAVGSL SVTASSRKLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-129 | 67 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-129 | 67 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-129 | 67 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 1e-98 | 53 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-98 | 53 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-98 | 53 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 1e-98 | 53 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 1e-98 | 53 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 3e-93 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr4_1686 | YP_733819.1 | phage integrase family protein | VFG1092 | Protein | 7e-130 | 67 |
