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Name : Shewmr4_0158 (Shewmr4_0158) Accession : YP_732296.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 181359 - 182582 bp Length : 1224 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F DNA sequence : ATGCCAGCATTTGAATATAAGGCGCTGGACGCCAAGGGAAAACAGCTAAAAGGGGTGATTGAGGCGGATACCGCCAGACA TGCTCGTAGTCAGCTGCGTGACCAACGCATGATGCCGCTGGAGATTTTGCCGGTCACCGAAAAGGAAGCCAAGGCAAAAG GCACCGGATTCTCGCCCTTTAAACGCGGGATTTCGGTGGCGGAATTAGCGTTGATCACCCGTCAAATCGCCACACTGGTC GCGGCGGGCTTACCGATTGAGGAATGTCTCAAGGCGGTGGGTCAGCAATGTGAGAAGGCGCGCCTAGCCAGTATGATCAT GGCGGTGCGCTCCCGCGTGGTGGAAGGCTATAGTCTGGCCGACTCTCTTGCCGAGTTTCCGCATATTTTCGATGACTTAT ACCGAGCTATGGTGGCCTCGGGTGAAAAATCCGGTCACTTGGAAGTGGTGCTTAACCGCTTAGCCGATTACACCGAGCGC CGCCAGCAGCTGAAGTCCAAACTGCAACAGGCGATGATTTACCCCATTATGCTGACCATTGTTGCCATTGGTGTAGTGTC AGTGTTGCTGGCGGCTGTGGTACCAAAGGTGGTGGGGCAATTTGAACATATGGGCGCCGAGTTACCCGCAACGACCCGTT TCTTAATTGCCGCCTCTGACTTTGTGCAAAGCTATGGCCTACTCGTGGTATTGATTATTGGTATTTTGCTGGTGGTGTTT CAGCGTTTACTTAAGTCACCGATTTTCAAGATGAAATACCATACGTTTTTGCTGAAAATGCCAGTGGTTGGCCGTGTGAG TAAAGGGCTTAATACCGCGCGATTTGCGCGAACTCTGAGTATTTTATCTGCCAGTTCGGTGCCTTTGTTAGATGGGATGC GCATTGCCAGCGAAGTATTGCAAAATGTGCGGGTGCGGGCGGCGGTAGATGATGCTACGGCGCGCGTACGGGAAGGAACT AGCCTAAGCACTGCGTTGACTAACACTAAGCTGTTCCCGGCGATGATGTTATATATGATCGCCTCGGGGGAGAAGAGTGG TCAGCTCGAAGACATGCTTGAGCGCGCAGCTGATAACCAGGATAGGGAATTCGAGAGTAATGTTACACTTGCCCTCGGGG TTTTCGAGCCGGCATTGGTGGTGAGCATGGCGGGGGTTGTACTCTTTATCGTGATGGCCATTCTGCAACCTATCTTGGCA CTGAACAATTTGATTAGTGGCTAG Protein sequence : MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRMMPLEILPVTEKEAKAKGTGFSPFKRGISVAELALITRQIATLV AAGLPIEECLKAVGQQCEKARLASMIMAVRSRVVEGYSLADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKLQQAMIYPIMLTIVAIGVVSVLLAAVVPKVVGQFEHMGAELPATTRFLIAASDFVQSYGLLVVLIIGILLVVF QRLLKSPIFKMKYHTFLLKMPVVGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVLQNVRVRAAVDDATARVREGT SLSTALTNTKLFPAMMLYMIASGEKSGQLEDMLERAADNQDREFESNVTLALGVFEPALVVSMAGVVLFIVMAILQPILA LNNLISG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 6e-100 | 57 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-99 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr4_0158 | YP_732296.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-98 | 57 |
| Shewmr4_0158 | YP_732296.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-92 | 49 |
| Shewmr4_0158 | YP_732296.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-80 | 45 |
