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Name : Shewmr4_0157 (Shewmr4_0157) Accession : YP_732295.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 179790 - 181355 bp Length : 1566 bp Strand : + Note : KEGG: son:SO0167 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGTGAAATACAAGTAACCCAAGTCGAGGATTTAAGCCTAGTTTCTAACGAACTAGGGCTTGAAGCCGAAGGTGATGA GGTATTTCGCTCCAGCAGCAAAGAGCGTTTACCCTTTGCCTTTGCCCACCGCCATGAGGTGATTTTAGCCTTTGGCGAGG ATGGTGCCTTGAGCCTGTTTTATACCGCCAAAACCCCGTTAACGGCCATGCTCGAAGCGCGCCGTTACTCGGGTGTGGAT TTGCCGCTGGTATTGCTCGAACCGGGCAAGTTTGAGGCGAAATTAACTCAGGCCTATCAAGCCAACTCCTCCGAAGCGCA GCAGCTGATGGAAGATATTGGCAACGAGATGGATTTATTCACCCTCGCCGAAGAGCTGCCGCAGACCGAAGATCTGCTCG AAGGCGATGATGATGCGCCTATTATCAAGCTGATTAACGCCTTGTTATCTGAAGCGATTAAAGAAGAAGCCTCGGATATC CATATCGAAACCTACGAGAAGCAGTTGGTCGTGCGTTTCCGTATCGACGGTGTGCTGAAGGAAGTGCTTAAGCCGAATCG TAAGTTGTCATCCTTGTTGGTGTCGCGGATCAAGGTGATGGCGCGTCTCGATATCGCCGAGAAACGTGTGCCACAAGACG GCCGTATTTCGCTGCGGATTGCGGGTCGTGCGGTGGATGTGCGGGTATCGACCATGCCATCGAGCCATGGCGAGCGTGTG GTGCTGCGTCTGTTAGATAAAAACGCCGGTAATCTGGATTTAAAACAATTGGGTATGACCGACAGTATCCGTGCCAAGTT CGACGAGCTTATTCGTCGTCCCCACGGCATTATTCTGGTCACAGGCCCTACGGGTTCCGGTAAGAGTACTACGCTGTACG CCGGGCTTACCGAAATTAACTCCAAAGATACCAACATCTTAACCGTTGAAGATCCGATCGAATACGAGTTAGAAGGCATA GGTCAAACCCAAGTGAACACTAAGGCTGACATGACCTTCGCCCGTGGTCTGCGTGCGATTCTGCGTCAGGACCCGGATGT GGTGATGATCGGCGAAATCCGTGACCTAGAAACCGCCCAAATTGCGGTGCAGGCATCCTTGACCGGTCACTTAGTGATTT CAACCCTGCATACCAACACGGCTTCTGGTGCAATTACCCGTTTGCAAGACATGGGCGTAGAGCCATTCCTAGTCTCATCG AGTTTGCTTGGGGTATTAGCCCAGCGTTTAATTCGTACTCTCTGTCCAAAATGTAAGACAGAGCATGTGCCCGATGCCCG TGAGCGTGAGCTGCTGGGAATGGCGGCAGACGATCATCGTCATATTTATCGCGCCAATGGCTGTAAGGCCTGTGGTAGCA GTGGCTACCGTGGTCGTACGGGTATCCATGAGCTATTGCTGGTCGATGATAATGTGCGCGAGCTGATCCACGGTGGACGT GGCGAACTGGCGATTGAGAAATATATCCGCCAGTCGGTGCCAAGCATTCGCCACGATGGCATGAGCAAGGTGCTCTCAGG TATCACCACTCTGGAAGAAGTCCTGAGGGTGACCCGCGAGGAGTAA Protein sequence : MSEIQVTQVEDLSLVSNELGLEAEGDEVFRSSSKERLPFAFAHRHEVILAFGEDGALSLFYTAKTPLTAMLEARRYSGVD LPLVLLEPGKFEAKLTQAYQANSSEAQQLMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEASDI HIETYEKQLVVRFRIDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGERV VLRLLDKNAGNLDLKQLGMTDSIRAKFDELIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGI GQTQVNTKADMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTLHTNTASGAITRLQDMGVEPFLVSS SLLGVLAQRLIRTLCPKCKTEHVPDARERELLGMAADDHRHIYRANGCKACGSSGYRGRTGIHELLLVDDNVRELIHGGR GELAIEKYIRQSVPSIRHDGMSKVLSGITTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-151 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-151 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 1e-150 | 65 |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 1e-151 | 63 |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 2e-137 | 57 |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 1e-78 | 47 |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG1880 | Protein | 9e-87 | 43 |
| Shewmr4_0157 | YP_732295.1 | type II secretion system protein E (GspE) | VFG0112 | Protein | 2e-84 | 42 |
