Gene Information

Name : Shewmr4_1479 (Shewmr4_1479)
Accession : YP_733614.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1733050 - 1733799 bp
Length : 750 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2927 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCTAACGTCGTTTCAAAAAACAGTGCCATCAATGTTGTTAACCTCGAAAAATCGGTGACTACTCAGGAAGGTTCGCT
CACTATCCTCAAGGGCATTAACTTAGATGTCAAGCAGGGGGAAAGTGTGGCGATATTAGGCCCCTCAGGTTCGGGCAAAT
CGACACTGCTTGGCTTACTCGCCGCGCTCGATACCCCCACTTCGGGGGAGATTTGGCTCGATGGCCAAGCCCTATCACCG
CTCAATGAAGAACAGAAAGCCGCGCTGCGTAAGCAGAAGGTGAGCTTTATTTTTCAATCTTTTATGTTAGTTGATACCTT
AACTGCCCTCGAAAATGTGATGCTACCTGCCGAGCTTGCTGGGGTTAAAAATGCCAAGGAGAAGGCCGAGGCCATGCTGG
GGCGCGTGGGGTTATCCCACCGTTTGACCCATTTACCTAAACAGCTATCCGGCGGCGAGCAGCAAAGGGTGGCCATTGCT
CGCGCCTTTATCTGTGAACCTAAGGTGCTATTTGCCGACGAGCCAACCGGCAATTTGGACAGTGTTAACGGCCATAAAAT
TGCCGATATGTTGTTTGAGCTGAACCAAGAGAGCCACACCACGCTCATCCTAGTCACCCACGACTTGCAATTGGCGAAGC
GCTGCCAAAGGCAACTGGTTATGGACAACGGCCACTTACAGGAAGAGTTAGATTCGGCCTCATCGCACAGCGTGAATGAC
AACCTTGAATTAAGCGCCAAGGAGGCCTAA

Protein sequence : 
MSNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTSGEIWLDGQALSP
LNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVKNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIA
RAFICEPKVLFADEPTGNLDSVNGHKIADMLFELNQESHTTLILVTHDLQLAKRCQRQLVMDNGHLQEELDSASSHSVND
NLELSAKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_1479 YP_733614.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-35 49
Shewmr4_1479 YP_733614.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-33 43