Gene Information

Name : Shewmr4_1330 (Shewmr4_1330)
Accession : YP_733466.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1541694 - 1542860 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: vpa:VP0236 nucleotide sugar dehydrogenase

DNA sequence : 
ATGAAAATTGCTATTGCTGGTACAGGTTATGTAGGTTTATCTAATGCTGTGCTTTTGGCACAGTACCATCAAGTTACTGC
GGTTGATGTTATCGCGGGTAAAGTGGAGTTAATTAACGCTCGCAAATCACCGATTGTTGATGCTGAAATTGAAGAATATC
TGGCGCAGCGCGAGCTTAATTTAACCGCGACCTTGGATAAACAACTGGCGTATGAAGATGCTGATTTTGTAATTATTGCT
ACGCCAACGGATTACGATCCAAAAACGAATTATTTTAACACTTCTACTGTTGAGTCGGTCATTCAAGATGTGTTAGCCAT
TAACCCTAATGCGGTGATGGTGATTAAAAGCACAGTACCGGTTGGTTTTACCGCCAAGGTTAAGCAAAAGTTCCAGTGCG
AAAATATTTTATTCTCCCCAGAGTTTTTGCGTGAGGGGAAAGCGCTTTACGATAACTTGCATCCATCGCGGATTATTGTC
GGTGAGCGTAGCGAGCGCGCAAAAATATTTGCTGATTTATTAGTGCAAGGCGCAGTGAGAAAAGATATTGAAGTTTTATT
TACTGATTCGACCGAGGCCGAAGCGGTTAAATTATTCTCTAATACTTATCTTGCGATGCGTGTAGCTTACTTTAATGAGC
TTGATACTTATGCTGAGACTCATGGTTTAGATTCGCGCCAAATAATCGAAGGTGTGTGTTTAGATCCACGTATTGGTAAT
CACTACAATAATCCATCCTTTGGTTATGGTGGTTACTGTTTACCTAAAGATACTAAGCAATTACGGGCTAATTATGCAGA
TGTACCTAATAGCATTATTGGCGCTATCGTTGAGTCAAACACGACCCGTAAAGATTTTATTGCTGACTCTATTTTAAGCC
GCAACCCTAAGGTTGTGGGGATTTATCGCCTAATTATGAAGTCGGGTTCGGATAACTTTCGCGCCTCCAGCATTCAAGGC
ATTATGAAGCGCCTTAAAGCTAAAGGCATTGAGGTCATTGTGTATGAGCCAGTACTTAAAGAGAAAGAGTTTTTCCATTC
TCGTGTTGTGACAGATTTGACCGCTTTCAAAGCGGTTGCCGATGTGATTGTGTCTAACCGTATGGCTAAAGAGTTAGCCG
ATGTGGCGGATAAGGTTTATACGCGCGATTTGTTTGGAAGTGATTGA

Protein sequence : 
MKIAIAGTGYVGLSNAVLLAQYHQVTAVDVIAGKVELINARKSPIVDAEIEEYLAQRELNLTATLDKQLAYEDADFVIIA
TPTDYDPKTNYFNTSTVESVIQDVLAINPNAVMVIKSTVPVGFTAKVKQKFQCENILFSPEFLREGKALYDNLHPSRIIV
GERSERAKIFADLLVQGAVRKDIEVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSDNFRASSIQG
IMKRLKAKGIEVIVYEPVLKEKEFFHSRVVTDLTAFKAVADVIVSNRMAKELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-96 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_1330 YP_733466.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-101 56