|
Name : fliP (Shewmr4_1292) Accession : YP_733428.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1499081 - 1499827 bp Length : 747 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGATGAAGTACATACTCACCTTGATAGGGGTTAGTACCCTGTTGTTTGCCGCATCGGTGGGCGCGGCCGATGGTGTACT GCCGGCGGTAACCGTAAAAACCGCTGCCGATGGTTCGACCGAATATTCGGTGACCATGCAGATCCTATTACTAATGACCT CGCTGAGCTTTATCCCTGCGATGGTCATTATGTTGACGTCATTTACCCGCATCATAGTGGTGCTCTCGATTTTGCGCCAA GCCATTGGTTTACAACAGACACCTTCTAACCAAGTCTTGATTGGCATGAGCCTGTTTATGACCTTTTTCATTATGGCGCC AGTGTTCGACAAAATTTATGACCAAGGGGTTAAGCCTTATATTGATGAACAGCTCACGCTACAACAGGCCTTCGATAAGG GCAAAGAGCCATTACGGGCATTTATGTTAGGGCAGGTGCGTACCACAGATCTGAAAACCTTTATCGATATTTCGGGGTAT CAAAACATTAATTCCCCAGAAGAAGCGCCAATGAGCGTGTTGGTGCCAGCTTTTATCACCAGTGAACTAAAAACCGCCTT TCAAATTGGCTTTATGTTGTTTGTGCCTTTTTTAGTGCTAGATCTCGTGGTGGCCAGTATCTTGATGGCCATGGGTATGA TGATGCTCTCGCCGATGATTGTTTCTTTACCCTTCAAGATCATGTTGTTTGTGCTTGTCGATGGTTGGGGCCTAGTGATG GGCACTTTAGCCAATAGCTTTGGTTAG Protein sequence : MMKYILTLIGVSTLLFAASVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM GTLANSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-16 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-14 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_733428.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 7e-58 | 67 |
| fliP | YP_733428.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-50 | 60 |
| fliP | YP_733428.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-51 | 58 |
| fliP | YP_733428.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 9e-48 | 53 |
| fliP | YP_733428.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 3e-17 | 41 |
