Gene Information

Name : Shewmr4_1163 (Shewmr4_1163)
Accession : YP_733300.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1369542 - 1370495 bp
Length : 954 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein

DNA sequence : 
ATGTACAAGTTTAATCCGCAGCGAATTCAAATTGGGATCAGTGCCTGCCTACTAGGGGAGAAGGTGCGTTTTGACGGTGG
GCATAAAAATTCTTCCTATTGTAATCAAGAGATTGCCCCTTTTTTTGATTATGTTCCCTTGTGTCCAGAAATGGCGATTG
GCCTAGGTGCACCGCGAAAAAGCATTCGATTAGTGCGCGATGGTGAGCAGATCCGAGTGCAGAGTGGTGATGGCAGCTTA
GATGTCACCGACAAACTCAATCGCTTTAGCGAGCAAAAGGTTGAGGAATTAGGCTTTTTAGGCGGTTACTTACTCTGCGC
CAAATCGCCAACCTGCGGTATGAAACGGGTGACTGAGTACAAAATCGGTACCAATAATGGCACTAAATCAGGCATTGGAG
TGTTTGCCCGTAAATTAATGGAACGCTACCCCTATCTCCCCGTCGAGGAAGAAGGTCGCCTGCACGATATGGTGCTGCGG
GAAAACTTTTTTACCCGAGTCTATGCCTATCACGACTGGCATAAGATGTGTCATGAGGGCCTAACCAAGCACAAGTTAGT
CAAGTTTCACTCCCGCTATAAGTACCTATTGATGGCCCATAGCCCTAAATGGTACCGCGAGCTAGGGCCGATTGTGGCCA
ATATTGAAGACTTAGATCAAACCGCCGAGCGCTATTTTGCGGGCTTTATGACCGCCTTAAAAATCAATGCGACCCGTCGA
AACCATACCAGCACCTTACAACATATTCAGGGCTATTTTAAAAAGCATTTGAATAAGGAACAGAAGTTAGAACTGTCTGA
AATGATTATGAAATATCGCCAAGGGCTTCTCCCTTTGCTGGTGCCTATCACTTTGATTAACCACTATTTGCGCCAATTTC
CCACCCCCTATATTGAGGATCAAGTGTACTTAAATCCCCATCCTGAGGAATTAAAGCTGCGCTATGCCTATTAA

Protein sequence : 
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFDYVPLCPEMAIGLGAPRKSIRLVRDGEQIRVQSGDGSL
DVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMKRVTEYKIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHKMCHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLDQTAERYFAGFMTALKINATRR
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-70 46
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-70 46
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-70 46
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-70 46
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-70 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr4_1163 YP_733300.1 hypothetical protein VFG0490 Protein 1e-70 46