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Name : Shewmr4_1124 (Shewmr4_1124) Accession : YP_733261.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1318235 - 1320820 bp Length : 2586 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAATCCTATAGATACCGATGATTTAGAAAAACATACCCCTATGATGCGTCAATATTTGACCATGAAAGCAGAGCATCA CGACATGCTGCTGTTTTATCGTATGGGTGACTTCTATGAACTCTTCTATGATGACGCAAAACGCGCCTCTGAATTATTGG GCATTTCCCTTACAGCTCGCGGCAAAAGTGGTGGCGATCCGATCCCGATGGCGGGAATTCCTTACCATGCGGTTGAAGGC TATCTGGCCAAATTGGTTCAAATTGGTCAATCGGTCGCGATCTGTGAGCAGATAGGCGACCCCGCCACCTCAAAAGGCCC AGTTGAGCGAAAAGTGGTGCGTATCGTCACCCCTGGTACCTTGACCGACGAAGCCCTATTGCAAGAGAGACAGGACAATC TGTTAGCCGCGGTTTACCAAGGCAAAGTTGGTTTTGGCTACGCTACCCTCGATGTGTCTTCCGGCCGCTTCGTGATTGCT GAATTAGAGACAAAAGAGTCCCTCGAAGCCGAACTGCAACGTACCAATCCGGTCGAAATTCTCTATAGCGAAGATTTTGG CGCGATGGAGCTATTGCATCATTTTAAAGGCAAGCGTCGCCGCCCAGAGTGGGAGTTTGATTACGATACCAGCATCAAAC TGCTGCTGGCACAATTTGGCACTAAGGATTTGCACGGCTTTGGGATTACCGATGCCAGGCTTTCGCTACAAGCGGCTGGC TGCTTAATGCAATATGTGAAAGACACCCAGCGCACCGCCCTGCCACATATCAATGCCATTACCCGTTTCAATCAAACCGA TACGATTGTCTTGGATGCGGCAACGCGCCGTAACCTCGAGCTGACACAAAATTTGAGTGGTGGTCGAGATAACACCTTAG CAGCCGTACTCGACAATACCGCCACAGCCATGGGCAGCCGGATGTTGCAACGCTGGATCCATCAGCCGCTAAGGGACCAT GCCCAGATTTTTGCTCGCCAAACGGCCGTGAATGAATTGCTCGAGACCACTGCCCATGAGTCATTGCATGAGCAGCTTAA AGCCCTAGGCGATATCGAACGTATTATGGCAAGGCTGGCGCTGCGTACCGCTCGTCCAAGGGATTTTGCCCGCCTACGCC AAGCATTAAACCTATTACCTAAGTTGCAGCAATCACTCGCGCAATTAAGTGCGCCCCATACGGTGAAACTAGGCCAACTC TTAGGTGAGTTTCCCGAAGAGCAACAACTGCTTGAGCGCGCCATTGTCGATAACCCGCCGATGCTTATCCGTGACGGCGG CGTGATCCGTGAAGGCTACAATGCCGAGTTAGATGAATGGCGAGGTTTAAGTGAAGGAGCCACTGATTATCTAGTTCAGC TCGAGGCACGGGAAAAAGAGCGTACAGGCATTGCCACGTTGAAGGTTGGCTACAACCGAGTGCATGGCTACTACATCGAG GTCAGTCGCCTGCAATCGCAGCAAGTGCCGTTAAATTACCAGCGCCGTCAAACCCTTAAGAATATGGAGCGTTACATCAC GCCCGAGCTTAAGGAATACGAAGAAAAAGTGCTGTCGAGCCAAGGTAAGGCGCTCGCCCTTGAAAAACAACTATGGGACG AATTGTTTGATTTAATCCTCCCCAAGTTGCATGAGCTACAAGCCTTCGCCAGAGCGGCAGCCGAGCTCGATGTGCTGAGT AACTTTGCCGAACGTGCCGAAACCTTAGGGTATACCTGCCCAGAACTGAGCAGCGAAATCGGGGTAAAAATCGAAGCGGG TCGCCACCCAGTGGTTGAACGTGTGAGTCAAACGCCTTTTATCGCCAACCCTGTCACCCTGTACAATCAACGCCGGATGT TGATTGTTACAGGTCCAAACATGGGCGGTAAATCGACCTACATGCGCCAAGTGGCGCTTATCACCCTAATGGCACATATT GGCTGCTTTGTGCCAGCAGATCGCGCCATCATTGGCCCTATCGATCGGATTTTTACTCGGATTGGCGCCTCAGACGATCT CGCCTCTGGTCGCTCAACCTTTATGGTGGAAATGACTGAAACGGCAAATATTCTCCATAATGCAACCGCGCAAAGTTTAG TCTTGATGGATGAAATTGGCCGTGGCACCTCGACCTACGATGGCCTGTCATTAGCCTGGTCTGCGGCTGAATATTTAGCA CAGCAAGTCGGCGCAATGACGCTGTTTGCGACCCATTATTTCGAGTTAACACAATTACCGGAACTCATGGCTGGCGTCTA TAACGTGCACCTCGATGCAATTGAACACGAAGACACCATCGCCTTTATGCATGCAGTGCAAGAAGGTGCGGCCAGTAAGA GTTATGGTTTGCAGGTTGCGGCCCTTGCCGGGGTGCCTGCTCGGGTGATTAAGGCGGCAAAACACAAGTTACATCAACTT GAGAGCCGCGATCATCAAGTAGAAGGTGTTAATGTTAACGGCACTAGGGCACCGATCCAAACCCTGCTCGCTCTGCCTGA GCCGGTGGAGAATCCCGCTGTCAGCAAATTAAAAGCCATCAATCCCGATAACCTGACCCCAAAACAGGCGCTGGATTTAC TCTACGAGCTAAAACGCTTGAGTTAA Protein sequence : MNPIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGIPYHAVEG YLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKVGFGYATLDVSSGRFVIA ELETKESLEAELQRTNPVEILYSEDFGAMELLHHFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGITDARLSLQAAG CLMQYVKDTQRTALPHINAITRFNQTDTIVLDAATRRNLELTQNLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQPLRDH AQIFARQTAVNELLETTAHESLHEQLKALGDIERIMARLALRTARPRDFARLRQALNLLPKLQQSLAQLSAPHTVKLGQL LGEFPEEQQLLERAIVDNPPMLIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGIATLKVGYNRVHGYYIE VSRLQSQQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWDELFDLILPKLHELQAFARAAAELDVLS NFAERAETLGYTCPELSSEIGVKIEAGRHPVVERVSQTPFIANPVTLYNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI GCFVPADRAIIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLA QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPARVIKAAKHKLHQL ESRDHQVEGVNVNGTRAPIQTLLALPEPVENPAVSKLKAINPDNLTPKQALDLLYELKRLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewmr4_1124 | YP_733261.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 67 |
