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Name : Shewmr4_1096 (Shewmr4_1096) Accession : YP_733233.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1287676 - 1288821 bp Length : 1146 bp Strand : + Note : KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGAATTGGTCAGAACTCGATAACCAGATGATGAGCCGAGCCATACAACTGGCTCGCAAAGGATTTTATACCACTCGCCC CAATCCCAGTGTGGGCTGCGTTATCGTAAAAGATAATCAGATTGTCGGTGAGGGTTATCATCAAAAAGCTGGCGAGCCAC ATGCTGAGGTGCATGCACTGCGGATGGCTGGCGAGCTTGCCCGTGGCGCGACCGCCTATGTCACCTTAGAACCTTGCAGC CATTATGGCCGCACACCGCCGTGTGCCTTGGCACTGATTAATATTGGTGTAAAACGAGTCGTGGTGGCGGTTGAAGATCC CAATCCGCAGGTCGGTGGTCGCGGTATTCAAATGCTGCGCGATGCGGGCATTCAAGTGGATGTCGGTTTGCACCGCGACG AAGCTTACGCTTTAAATCTTGGTTTTATGAAGCGCATGGAATCAGGCCTACCTTGGGTGACGGTAAAGCTTGCCGCGAGC CTAGATGGTAAAACCGCGTTATCAAACGGTGTGTCCAAATGGATCACAGGCCCCGAAGCTCGCCGCGATGTGCAGCGCTT ACGTTTACGCGCCTGCGCGCTAGTGACGGGGATTGACACTGTGCTGGCCGATGACCCTTCGCTTAATGTGCGTTACTCAG AGCTTGGCAGTCTTAGCTCACAATTGAGTGAAGCGCAGATTTTACAACCGCTGCGGGTGATATTAGACAGTCGTTGCCGG ATGCCGATTACGGCAGCCTTGCTTGCGATTGAATCGCCGATGTTATTAGTCTCAACTGAGCCTTACTCGCCAGCCTTTAT GGCGCAGTTGCCCGCCCATGTGACTTGTCTTCAATTACCGGCGATTGATGGTCGAATCTCGCTGCCTGCACTCTTAAGCT ATTTAGGCAAAAGCTGTAATCAGGTGCTTATCGAAGCGGGCGCGACCTTAGCCGGCGCCTTTATCGGTGACGGATTAGCC GATGAATTAGTGTTGTATCAAGCGATGAAAATCCTTGGCGCACAGGGACGTAATCTACTCGAATTACCCGATTATCAAAT GATGGCCGATATTCCGACCCTCAAACTGGTCGATGAGCGTAAAGTGGGCGCGGATACGCGTTTCACCTTGAGGCTTACAT CCAATCCATCTTTAGCGAATAAGTGA Protein sequence : MNWSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGELARGATAYVTLEPCS HYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAAS LDGKTALSNGVSKWITGPEARRDVQRLRLRACALVTGIDTVLADDPSLNVRYSELGSLSSQLSEAQILQPLRVILDSRCR MPITAALLAIESPMLLVSTEPYSPAFMAQLPAHVTCLQLPAIDGRISLPALLSYLGKSCNQVLIEAGATLAGAFIGDGLA DELVLYQAMKILGAQGRNLLELPDYQMMADIPTLKLVDERKVGADTRFTLRLTSNPSLANK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 8e-70 | 50 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 8e-70 | 50 |
