Gene Information

Name : sync_0559 (sync_0559)
Accession : YP_729779.1
Strain : Synechococcus sp. CC9311
Genome accession: NC_008319
Putative virulence/resistance : Resistance
Product : sulfate permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 535589 - 536875 bp
Length : 1287 bp
Strand : -
Note : identified by match to protein family HMM PF00860; match to protein family HMM PF00916

DNA sequence :
ATGCCTTCTCTTAGACAAAAAATAAACTCTTTAGCAATAGCACCGTTACCAAATCTGCTGGCTGGCCTGGTGATGGCATT
GGTACTTATTCCGGAAGCAATCGGCTTCGCTGGAGTCGCTGGAGTCCCTCCAGAACTTGGCCTCTATGGCGCAATCTTTC
TAACGATCACAATCGCCTTCACAGGAAGTCGAATCGCGATGATCACCTCGGCATCAGGATCAACCGCAGTACTCATGACC
GGGCTTGCAGCTCAAGGAAATAACTTTGCAGACAACAAAGGAATTATTTTTTTATTAACAGCAAGCATGCTTGCGGGGCT
TCTCCAGATCATCTGGAGCCTCTTGAATATTTCGGCTTTAATGAAATACATCCCAAAACCTGTCGTGAGTGGATTCGTCA
ATGCACTGGCATTACTCATTTTACAAGCAGAATTGCCACAACTTGGCTTTGAACAACTTCTAGGACTTGAAAGACATCAG
GTAACTTACCTGCCAACAGTGAAAGAGCTACCAACCGTATGGGCTTTGACAGCGATAGGACTACTAATCATCTATTCATT
TCCATACATCACGAAGAAAATACCCTCACAGCTCATCTCAATTTCTGTCGTAACAATACTGGCATGGACGATGAGATTCG
ACGTACCAAGAGTTAGTGATCTGGGAAGCCTACCGCAGGGAATCCACTTACCGGAAATCCCATTCCTCATCAATGGAGCG
AACAACATTGCAGGCCTTGATCTTATATGGACAACAGCACCGATCGCAATTGCAATTTCGCTCGTAGGCCTATTAGAAAC
ATTTCTAACAGTCGATTACATCGATACACTAACAGAAACAACAGCGGATAAGCGGTCGGAAGGCATTGGACAAGGCATCG
CCAATATCATTACATCACTATTTGGCGGAATGGCCGGATGTGCACTCGTAGGCGAATCGGTCATGAACGTGAAAAATGGG
GCAAAATCACGACTATCAACCTTATCGACGGGACTATTTATAGTTACTATTCTAATTTTTGCAAGATCAATTCTTGGCTT
AATTCCCTTGGCCGCAGTCGCCGCAGTTATGATTTCAATCGCAGTTGCAACCGCAGATTCTGACAGCTTGAGGAGAATAG
GGAGACTACCTAAGATCGACACTCTTCTCATGATCGCTACATTTTTAGCGACGATGCTGACTCATCCCCACAACCTTGCT
GTAGGCGTGATCGTAGGCGTGAGCACATCTCAGTTATACGGATACATCCGAAGAAAAGCCAATCTACGATCAGATAAAAG
CGATTAG

Protein sequence :
MPSLRQKINSLAIAPLPNLLAGLVMALVLIPEAIGFAGVAGVPPELGLYGAIFLTITIAFTGSRIAMITSASGSTAVLMT
GLAAQGNNFADNKGIIFLLTASMLAGLLQIIWSLLNISALMKYIPKPVVSGFVNALALLILQAELPQLGFEQLLGLERHQ
VTYLPTVKELPTVWALTAIGLLIIYSFPYITKKIPSQLISISVVTILAWTMRFDVPRVSDLGSLPQGIHLPEIPFLINGA
NNIAGLDLIWTTAPIAIAISLVGLLETFLTVDYIDTLTETTADKRSEGIGQGIANIITSLFGGMAGCALVGESVMNVKNG
AKSRLSTLSTGLFIVTILIFARSILGLIPLAAVAAVMISIAVATADSDSLRRIGRLPKIDTLLMIATFLATMLTHPHNLA
VGVIVGVSTSQLYGYIRRKANLRSDKSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 1e-52 42
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 9e-53 42
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-52 42
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-52 42
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 2e-50 42
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-52 42
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 2e-50 42
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-52 42
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 1e-52 42
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-52 42
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 3e-50 42
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 1e-52 42
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 1e-52 42
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 3e-50 42
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 1e-52 42
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 1e-52 42
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 1e-52 42
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 1e-52 42
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-52 42