Gene Information

Name : rph (sync_0317)
Accession : YP_729551.1
Strain : Synechococcus sp. CC9311
Genome accession: NC_008319
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 325857 - 326582 bp
Length : 726 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACCGACACCTCTCGCAACGACGGACGTCGACCGGGCGACCTTCGACCCTTCTCGATCAGCTGGGATCCCATGGGATT
TGCGCTGAGTTCAGTGATCATCCACAGCGGACGCACCACTGTTCTTTGCAGCGTTTGCCATCAAGAAGGAGTGCCTCGCT
GGCGCAAAGATCAAGGGAAGGGGTGGCTCAGCGCCGAATACCGACTCCTGCCTGGATCCACTCCGGAGCGCCAAAACAGA
GAGCTACTCAAATTGAGCGGACGCACCCAGGAGATTCAGCGTCTGATTGGCCGCAGCCTGCGCGCAGCCATCGATATGGA
AGCTCTCGGCGAGAACACATTGAGAATCGATTGTGATGTGATTCAGGCAGATGCAGGCACCCGCACCGCTGCGATCAGCG
GATCTTGGGTTGCGCTTCAAAGGGCCTGTGAGCGGCTTGTTCAACAAGGAGTTCTCAATACCAATCCTGTCCAATCGCAG
GTGGCCGCCGTCTCCGTTGGCGTGATTCACAAACGCCCTTTACTCGACCTCGACTACAGCGAAGACAGCCAAGCCGATGT
GGATCTCAACGTCGTGATGAACGGAGAAGGGCATTTGCTGGAACTGCAGGGCACTGCCGAAGGAGCTCCTTTTAGCCGTC
ACCAGCTCAATGACCTACTGGACCTCGCCGAGCCTGGCCTCAAAAAAATCATGGATGATCAACGCGCGGCTCTGTCCGCT
GGATGA

Protein sequence :
MTDTSRNDGRRPGDLRPFSISWDPMGFALSSVIIHSGRTTVLCSVCHQEGVPRWRKDQGKGWLSAEYRLLPGSTPERQNR
ELLKLSGRTQEIQRLIGRSLRAAIDMEALGENTLRIDCDVIQADAGTRTAAISGSWVALQRACERLVQQGVLNTNPVQSQ
VAAVSVGVIHKRPLLDLDYSEDSQADVDLNVVMNGEGHLLELQGTAEGAPFSRHQLNDLLDLAEPGLKKIMDDQRAALSA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-48 51