Gene Information

Name : rdgB (sync_0272)
Accession : YP_729508.1
Strain : Synechococcus sp. CC9311
Genome accession: NC_008319
Putative virulence/resistance : Unknown
Product : deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 282801 - 283421 bp
Length : 621 bp
Strand : -
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGACCAACCGCGTCCTGGTCATTGCCAGTGGCAACGCCGGCAAAATCCGAGAGTTTTCGAACCTGCTTCAAGAATTGCC
TCTGCAAGTGAATCCTCAACCCGATGGAATCCAGGTGGAAGAAACCGGAATCACCTTCCGCGACAATGCATTGCTCAAGG
CCAGGGCCGTGGCGGAAGCCACTGGCCATTGGGCACTCGCCGATGATTCGGGCCTAAGCGTGGATGCACTGGGTGGTGCT
CCGGGGGTCTACTCCGCTCGCTATGCAAACTCCGACCCCGAACGCATCGAACGTCTTCTCAAAGAGCTAGGAGACCGCAC
CGACCGCCAGGCTCGCTTTAGTGCGGCCCTTTGCATCGCAGCACCTGACGGCAGCGTGCTTGCAGCAGTTGAGGGGTACT
GCGAAGGCTCGATCACCTTCAGCGCCCGGGGGACGCAAGGGTTCGGGTACGACCCCGTGTTTGAGGTCAAAAACAGTGGA
CTCACCTTTGCTGAAATGACGCAGGATCACAAAAAACAACACGGGCATCGAGGTCGCGCCTTTGCCCTGCTAAAGCCAGA
GCTGGAGAAGCTTCTCGAGAACGACCCAGGCCAAGACGCGGGCGCGACGCCAATTCCATAA

Protein sequence :
MTNRVLVIASGNAGKIREFSNLLQELPLQVNPQPDGIQVEETGITFRDNALLKARAVAEATGHWALADDSGLSVDALGGA
PGVYSARYANSDPERIERLLKELGDRTDRQARFSAALCIAAPDGSVLAAVEGYCEGSITFSARGTQGFGYDPVFEVKNSG
LTFAEMTQDHKKQHGHRGRAFALLKPELEKLLENDPGQDAGATPIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-13 43