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Name : sync_1928 (sync_1928) Accession : YP_731131.1 Strain : Synechococcus sp. CC9311 Genome accession: NC_008319 Putative virulence/resistance : Unknown Product : cytochrome C oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 1717633 - 1719327 bp Length : 1695 bp Strand : + Note : identified by match to protein family HMM PF00115 DNA sequence : ATGACCATGCAAAGCAAAACATACGACCTACGCATTCTCAAGGCACCTCATCCAGTTCCTGGAGCACCGGACAACTGGAA ACGCTTCTTCAGTTTCAACACCGACGCCAAAGTGATTGGAATCCAATACATCGCTACAGCGATGTTGTTCCTACTAGTAG GCGGACTTTTAGCGATGATCGTACGAGGCGAACTGATCACGCCTCCGGCCGATCTTGTCGATCCAAGTGTTTATAACGGC CTTTACACCATGCACGGAACAGTGATGCTGTTCCTATTTTTATTCCCAATTCTCAACGGCTTCAACAACCTGTTGATCCC AACGATGATCGGGGCACCAGATATGGCATTTCCAAAACTTAATGCCGCTGCTTTCTGGCTTGTGCCTGTGTTCTCCATTG TCTTAATGGGAAGCTTTTTCGCCCCCGGCGGTCCCGCATCATCGGGATGGTGGTCGTATCCGCCAATGAGTCTGCAAAAT CCGCTCGGCCATTTCATCAATGGAGAGTTTCTATGGATTCTTGCGGTGGCACTTTCCGGTATCTCCTCGATCATGGGAGC AATCAACTTCGTGACGACCATCATCCGGATGAGGGCCCCAGGGATGGGTTTCTTCAGAATGCCAGTTTTTGTTTGGACAG CATGGGCTGCCCAGACCATCCAGCTGATAGGACTGCCCGCTCTCACTGGTGGTGCGGTGATGCTTCTGTTTGACCTGAGC TTCGGCACCAGCTTTTTTCGACCAGAGGGTGGTGGCGATCCAGTGTTATTTCAGCACTTTTTTTGGTTCTATTCCCACCC AGCCGTATATGTGCTGGTTTTACCTGTGTTCGGTATTTTTTCTGAGCTCTTTCCGGTATATGCACGCAAACCACTATTTG GCTATCGCTTTGTAGCAATTGCCTCATTCGGAATCACTTTTCTCAGCCTAATTGTGTGGGCCCACCATATGTTTTACACG GGCACACCAAACTGGATGCGTCATATCTTCATGTTCACTACGATGCTCATTGCCATACCCACTGGAGTGAAAGTTTTCGC CTGGCTGGGAACACTTTGGGCAGGCAATTTAAGGTTAAATACACCGATGTTGTTCTGCATCGGCGGACTTATCAATTTTA TTTTTGCGGGAATCACTGGAGTCATGCTGGCCACAGTGCCAATCGATATTCACGTCGGCAACACCTACTTCGTCGTAGCC CACTTCCACTATGTGATCTTCAACACGATTGTGTTCGGTGTTTTCGCCGGCATTTATCACTGGTTCCCAAAGTTCACAGG GAAGATGTACTACGAAGGCCTTGGAAAAGTCCATTTCGTGCTCACCTTCATCGGCGCCACGCTCAATTGGCTACCACTCC ACTGGGCTGGATTGCTGGGCATGCCCAGGCGCGTTGCCTCCTACGACCCAGAATTCGCCATCTGGAATGTCATTGCCAGC ATCGGCGCTTTCATGCTTGGCGTTGCCTCAATCCCCTTCATCCTCAACATTGTGAGCTCATGGGCTCGCGGGCCCAAGGC TCCACCCAACCCCTGGCGAGCGATTGGCCTGGAGTGGCTGTTGCCATCTCCACCACCTGCCGAAAACTTTGAAGACGACA TTCCAACGGTGATTAGTGAGCCTTACGGCTATGGATTGAACAAACCCTTGGTTGAAGACCAGGACTATTACATCCGTCGC TCTATGGAGGCTTGA Protein sequence : MTMQSKTYDLRILKAPHPVPGAPDNWKRFFSFNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNG LYTMHGTVMLFLFLFPILNGFNNLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQN PLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLS FGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYT GTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVA HFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLLGMPRRVASYDPEFAIWNVIAS IGAFMLGVASIPFILNIVSSWARGPKAPPNPWRAIGLEWLLPSPPPAENFEDDIPTVISEPYGYGLNKPLVEDQDYYIRR SMEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 3e-98 | 46 |
