Gene Information

Name : sync_1757 (sync_1757)
Accession : YP_730961.1
Strain : Synechococcus sp. CC9311
Genome accession: NC_008319
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1596351 - 1597103 bp
Length : 753 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAGGATCGAGGCAGATCAGATCTGTGTTGACTACAACGGCACAGTTGCCCTCTACGACGCTTCTCTTCATCTGCCTGC
GGGATGCATCTGTGGTCTGGTGGGGATGAATGGGTCTGGTAAATCGACCCTTTTCAAGGCGCTCACTGGTTTTATTCGTC
CCTCACGTGGACACATCAAAATCAATGGTCGCAGTGTGTCTAGGGCTCAGCGTGATCAAGCTGTTGCGTATGTGCCTCAG
AACGAAGGGATCGATTGCGATTTTCCTGTCTCTGTTTGGGATGTGGTGATGATGGGTCGCTATGGAGCCATGAATGTGCT
CCGGATCCCACGGCAGTCAGACAGGGTTGCGGTTCGCGATGCCCTTGAGCGCGTTGAGCTTCTTGATCTAAGGGATCGCC
CGATCGCTGCTCTCTCCGGAGGTCAACGTAAACGGACCTTTTTGGCAAGAGCCATTGCACAGCGCGCATCGGTGTTGTTA
TTGGATGAACCCTTCAATGGCGTGGACGTTCGTACGGAGAAGTTGATGGCAGAGCTGTTTTTCCAGTTGCGTAAGGAAGG
ACGCACCATTTTGATTTCAACGCATGATCTCAGTCATGTCAGAGACTTCTGCGATCTCACAGTTCTAATCAATAAAACGG
TTTTGGCTTACGGTGAAACATCGAAGGTGTTCACTCCAGAAAATCTTTCTTTGGCCTTTGGTGGCCTCCCTCCAGATTTA
TTGACCGGAAATAGTTCCTCGGAGGACGCTTGA

Protein sequence : 
MRIEADQICVDYNGTVALYDASLHLPAGCICGLVGMNGSGKSTLFKALTGFIRPSRGHIKINGRSVSRAQRDQAVAYVPQ
NEGIDCDFPVSVWDVVMMGRYGAMNVLRIPRQSDRVAVRDALERVELLDLRDRPIAALSGGQRKRTFLARAIAQRASVLL
LDEPFNGVDVRTEKLMAELFFQLRKEGRTILISTHDLSHVRDFCDLTVLINKTVLAYGETSKVFTPENLSLAFGGLPPDL
LTGNSSSEDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-52 57
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-52 57
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-50 56
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-51 56
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-51 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sync_1757 YP_730961.1 iron ABC transporter ATP-binding protein BAC0350 Protein 3e-51 56
sync_1757 YP_730961.1 iron ABC transporter ATP-binding protein BAC0440 Protein 2e-56 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sync_1757 YP_730961.1 iron ABC transporter ATP-binding protein VFG0526 Protein 3e-51 56