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Name : sync_1756 (sync_1756) Accession : YP_730960.1 Strain : Synechococcus sp. CC9311 Genome accession: NC_008319 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1595488 - 1596354 bp Length : 867 bp Strand : - Note : identified by match to protein family HMM PF00950 DNA sequence : TTGACTACATTTTTGCTCGAGCCTCTTCAGCACGCCTTCATGGTGAGGGCTCTTCTAATCAGTGCCACCGTTGGTGCCGT TTGCGGTCTCCTGTCTTGTTACATGACTCTCAAGGGCTGGGCGTTGATGGGTGATGCGGTTTCTCATTCAGTGTTGCCAG GGGTCATCCTGGCCTATGCCATTGGACTGCCTTTTTCGGTTGGGGCCTTTGTCTTTGGTGTGGGATCAGTCGCCATGATT GGCTTCGTTAAGCAGAAGTCCCGAATTAAAGAAGACACGGTGATTGGCCTTGTTTTTACTGGTTTCTTCGCTCTTGGACT GGTGCTGGTCTCGAAGACGCGGAGCAATATTGATCTCACTCATATTCTTTTTGGCAATGTGCTTGGTATCTCTATTGCTG ATATTCAACAAACGGTTCTGATTTCAGCTCTTGTAACTGCTGTTCTTTTGTTATTCCGTCGTGATCTTTTGTTGTTTTGT TTCGACCCGACGCATGCACGCTCGATTGGAATCAACACGGGTGTTCTCCATTACCTCCTTCTCTCTGTGCTCTCTCTTGC TGCGGTTGCTGGTTTGCAAACGGTAGGCATCATTTTGGTGGTGGCCATGCTGGTTACTCCTGGGGCTACTGCTTATCTGC TAACAGATCGCTTTGATCGAATGAGTTGGTTGGCGATTGGCAGCAGCATTCTTTCCAGTCTTCTTGGCGTATATACAAGT TATTGGACTGATAGTTCACCAGCTGGTTGCATCGTTCTTGTACAGACAGGTTTGTTTGTGATGGCGTTTCTGTTTGCTCC TAAGCACGGGATCTTGCGCCATCGATTCGCATCGTCGATGCCAATTTCAAGGTTGCCGAATCCATAA Protein sequence : MTTFLLEPLQHAFMVRALLISATVGAVCGLLSCYMTLKGWALMGDAVSHSVLPGVILAYAIGLPFSVGAFVFGVGSVAMI GFVKQKSRIKEDTVIGLVFTGFFALGLVLVSKTRSNIDLTHILFGNVLGISIADIQQTVLISALVTAVLLLFRRDLLLFC FDPTHARSIGINTGVLHYLLLSVLSLAAVAGLQTVGIILVVAMLVTPGATAYLLTDRFDRMSWLAIGSSILSSLLGVYTS YWTDSSPAGCIVLVQTGLFVMAFLFAPKHGILRHRFASSMPISRLPNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-41 | 50 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 3e-41 | 50 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-41 | 50 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-41 | 50 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-41 | 50 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 7e-38 | 49 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 1e-37 | 49 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-37 | 48 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-37 | 48 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-37 | 48 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 1e-32 | 44 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 1e-32 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sync_1756 | YP_730960.1 | ABC transporter | BAC0351 | Protein | 2e-41 | 50 |
| sync_1756 | YP_730960.1 | ABC transporter | BAC0352 | Protein | 4e-38 | 49 |
| sync_1756 | YP_730960.1 | ABC transporter | BAC0441 | Protein | 1e-41 | 47 |
| sync_1756 | YP_730960.1 | ABC transporter | BAC0442 | Protein | 1e-40 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sync_1756 | YP_730960.1 | ABC transporter | VFG0527 | Protein | 1e-41 | 50 |
| sync_1756 | YP_730960.1 | ABC transporter | VFG0528 | Protein | 4e-38 | 49 |
