|
Name : kdpA (H16_B0898) Accession : YP_729055.1 Strain : Genome accession: NC_008314 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 1017683 - 1019503 bp Length : 1821 bp Strand : - Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGTCCTCCCAATTCGTGGGCCTGCTGGTCCTCTATCTCGCCATCCTGCTGGCGTGCGCCCCTTTTCTCGGACGCTATAT CCGGCGTGCGGTGGAGGATGGCAACTATTCGCTGACCGCCTGGGGCCGGCCGCTGGAACGGCTGCTGTATCGCCTGGGCG GCGTGCGTGCCGATGCCGGGATGGGGTGGACGCAGTACGCCGTCGCGGTGCTGGCATTCAACCTGCTTGGCGTGGTGGCA GTCTATGCGCTGCAGCGCCTGCAAGGCATGCTGCCGCTCAATCCGCAGGGCTTTGGCGCGGTTTCGCCGGACTCGGCCTT CAACACGGCGATCAGCTTTGTCGCCAACACCAACTGGCAAGGCTATGGCGGCGAGTCGACCATGGGCTATCTGACGCAGA TGCTCGCGCTCACCGTGCAGAACTTCCTGTCCGCGGCGACCGGCATCGCCGTGGTGTTCGCGCTGATGCGCGGATTCGCG CGCCAGAGCGCCGCCACCATCGGCAATTTCTGGGTCGACATGACGCGGGTCACGTTGTACGTGCTGGCGCCGATCGCGAC CGTGATTGCACTTGCCCTGGTCAGCCAGGGAGTGACCCAGAACTTCGATGCCTACAAGGAAGCCAGCCTGGTCACGCCGG TGGAGTACAGCCAGCCTAAGCTCGATGCGGCCGGGCAACCGGTGCTCGATGCACAAGGCAAGCCGGTGACGGAAGACCTG AAGACCGACAGGCAGACGCTGGCGATGGGCCCGGTTGCCTCGCAAGAGGCCATCAAGATGCTGGGCACCAACGGTGGCGG CTTCTTCAATGCCAACTCGGCGCATCCGTTCGAGAACCCGAATGGCCTGGCCAACCTTCTCGAGATGCTGGCGATCTTCC TGATCCCGGCGGCGCTGTGCTTCACCTTTGGCGAAATGGTGGGAGACAGGCGACAGGGTGTGGCGGTGCTGGCTTCCATG ACGGTCATCTTTGTCGCGATGGCCTGCGTGGCGGCGATGTCCGAGCAGATGGCGACCCCGGCGCTGGCCGGATTGCCGGT GGATCACGCCGCGTCGCTGCTGCAGGCCGGCGGCAATATGGAAGGCAAGGAAACGCGCTTCGGCATCGCCGCTTCGGCAC TGTTCGCCACCATCACGACCGCGGCGTCGTGCGGCGCGGTCAATGCCATGCATGACTCCTTCACCGCCATCGGTGGCCTG GTGCCGATGCTGCTGATGCAGCTGGGCGAGGTCGTGTTCGGCGGCGTCGGCTCGGGGCTGTACGGCATGCTGGTCTACGC CGTGCTCGCGGTGTTCATCGCCGGACTGATGATCGGGCGCACGCCGGAGTACCTCGGCAAGAAGATCGAAGTCTACGAGA TGAAGATGACGGCCGTGGCGATCCTGGTCACGCCCCTGCTGGTGCTGCTCGGCACGTCGGTGGCGGTGATGACCGAGGCC GGACGCGCCGGTGTGTTCAATCCCGGCACGCACGGCTTCTCCGAGATCCTGTACGCGCTCTCGTCGGCGGCCAACAACAA TGGCAGCGCCTTTGCGGGCTTGTCCGCCAACACCCCGTTCTACAACACGCTGCTGGCGGCGGCCATGTGGTTCGGCCGGT TCTGGATCATCATCCCGGTGCTTGCGCTGGCGGGCTCGCTGGCAGCCAAGAAGCGCGTGCCCGTGAGCGGCGGCACGATG CCGACGCACGGCCCGCTGTTCGTCGTCCTGCTGGTGGGCACCGTGCTGCTGGTCGGTGCGCTGACCTATGTCCCGGCGCT GGCGCTGGGGCCAGTCGCCGAGCAACTCCAGGGCGCGGTGACGGCAACCGCGGCGAAGTAA Protein sequence : MSSQFVGLLVLYLAILLACAPFLGRYIRRAVEDGNYSLTAWGRPLERLLYRLGGVRADAGMGWTQYAVAVLAFNLLGVVA VYALQRLQGMLPLNPQGFGAVSPDSAFNTAISFVANTNWQGYGGESTMGYLTQMLALTVQNFLSAATGIAVVFALMRGFA RQSAATIGNFWVDMTRVTLYVLAPIATVIALALVSQGVTQNFDAYKEASLVTPVEYSQPKLDAAGQPVLDAQGKPVTEDL KTDRQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPFENPNGLANLLEMLAIFLIPAALCFTFGEMVGDRRQGVAVLASM TVIFVAMACVAAMSEQMATPALAGLPVDHAASLLQAGGNMEGKETRFGIAASALFATITTAASCGAVNAMHDSFTAIGGL VPMLLMQLGEVVFGGVGSGLYGMLVYAVLAVFIAGLMIGRTPEYLGKKIEVYEMKMTAVAILVTPLLVLLGTSVAVMTEA GRAGVFNPGTHGFSEILYALSSAANNNGSAFAGLSANTPFYNTLLAAAMWFGRFWIIIPVLALAGSLAAKKRVPVSGGTM PTHGPLFVVLLVGTVLLVGALTYVPALALGPVAEQLQGAVTATAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 9e-83 | 44 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 6e-83 | 44 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-59 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-59 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 5e-60 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 1e-59 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-59 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-59 | 42 |
