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Name : kdpB (H16_B0897) Accession : YP_729054.1 Strain : Genome accession: NC_008314 Putative virulence/resistance : Unknown Product : potassium transport system ATPase chain B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 1015354 - 1017579 bp Length : 2226 bp Strand : - Note : 7 TMHs DNA sequence : ATGCAACAAGATTCGATGGCCCCGGTGGCCAAGCGCGGCGCCAACACGGCTGAAGCGTCTTCCTCCAACACGATTCAGGC AAAGAGCGCGCCGGTGTCCGACCGCCAACACGGCTCCCACCATCATCGCCCGCCGGCGCGCAGCATGTTCGCGCCGGAGC TGGTGAAGCCCGCGCTGGTCGCGGCCTTCGGGAAGTTGTCGCCGCGCGACCAGCTGCGCAACCCGGTGATGTTCGTGGCC TACGTGGGCAGCATCCTGACGACGATCCTTTTCCTGAAGGCCATGGCCGCGCCGGCGGCAGCCCCCGGTGGGGAATCCGC GGGCTTCATCCTGGCGGTGTCGGTGTGGCTGTGGTTCACGGTGCTGTTCGCTAACTTTGCCGAGGCACTTGCCGAAGGCC GAAGCAAGCAGCAGGCGGAAGCGCTGCGCGGCCTGAAGACCACCGTCACCGCACGTGTGCTGAAGGACGGCAAGCGTGGC AGTGCCACCGAAGCGCGCCCCGCCACGGCGCTGCGCCGTGGCGACGTGGTGCTGGTACAGGCCGGCGAGATGATCCCCGG CGACGGCGAAGTGATCGACGGCGTGGCCTCGGTCGACGAAAGCGCCATCACCGGCGAATCGGCGCCGGTGATCCGCGAGT CGGGCGGCGACTTCTCGTCGGTGACCGGCGGTACACGCGTGCTGTCCGACTGGATCGTGGCGCGCATCACGACCAACCCG GGCGAGAGCTTCATCGACCGCATGATCACGATGGTTGAAGGCGCCAAGCGGCAGAAGACGCCGAACGAACTGGCCCTGAC GATCCTGCTGGTCGGGCTGACCATTGTGCTGCTGCTGGCCACGGCCACGCTGCAGCCGTTCTCGCTCTACAGCGTGCTGG TGGCAAAGGCAGGCGTTCCGGTGACGATCACGGTGCTGGTGGCCCTGCTGGTCTGCCTGATTCCCACCACCATCGGCGGG CTGCTGTCAGCCATTGGCGTGGCGGGCATGAGCCGGATGATGGAAGCCAACGTGATTGCCACCTCGGGCCGTGCGGTCGA AGCCGCTGGTGACGTGGACGTGCTGCTGCTCGACAAGACCGGCACCATTACCCATGGCAACCGCCAGGCATCGCGCTTCA TCCCGGCCCCGGGCGTGTCGCCGCTGCAGCTCGCGGAAGCGGCGTGGCTGTCGTCGCTGGCCGACGAGACCCCGGAAGGC CGCAGCATCATCACGCTGGCACGCCAGCTGCCGGGGCTGGCGGCGCCGGTGATGGCGAGCCTGAAGCCGGAGTTCGTGCC GTTCAGCGCCCAGACCCGCATGAGCGGGGTTGACCTGAGCGATGGCGGCGGCGAGCGTCACGTGCGCAAGGGTGCGGCCG ATGCCGTGCGCCGCTACGTCACGGAACGTGCCGGCAAGTTCCCCGATGCTGTCCTGCAAGCCGTCGATGAGGTTGCCCGC GCCGGCAGCACGCCGCTGGTGGTAGCCGACGCCAACGGCGGTTCGGTACGCGTGCTTGGCGTGATCGAGCTGAAAGACAT CGTCAAGACCGGCATTCGCGAGCGCTTCGGCGAACTGCGCAAGATGGGCATCAAGACCGTGATGATCACCGGCGACAACC GGCTGACGGCGGCTTCGATTGCGGCGGAAGCCGGCGTTGACGACTTCCTGGCCGAAGCCACGCCGGAAGCCAAGCTCAAG CTGATCCGCCAGTACCAGGCCGACGGGCGGCTGGTCGCGATGACCGGCGACGGCACCAACGACGCGCCGGCACTGGCCCA GGCCGACGTAGCCGTAGCGATGAACAGCGGCACGCAGGCGGCCAAGGAAGCCGGCAACATGGTGGACCTCGACAGCAACC CGACCAAGCTGATCGAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTCGCTGACGACCTTCAGCGTGGCC AACGACATCGCCAAGTACTTCGCGATCATCCCGGCGGCGTTTGCCACCACCTATCCGCAGCTCAACCTGCTCAATGTGAT GGGGCTCGCCACGCCGGCGTCGGCCATCATGTCGGCGGTGATCTTCAACGCGCTCATCATCGTCGTGCTGATCCCGCTTG CGCTCAAGGGCGTGGTCTACCGGCCGCTGGGCGCCGCGGTGCTGCTGCGCCGCAACCTGCTGGTCTACGGCCTGGGCGGC ATCCTGGTGCCGTTTGCCGGCATCAAGCTGATCGACATGATCCTGGCCCTGTTTGGCTGGGTCTGA Protein sequence : MQQDSMAPVAKRGANTAEASSSNTIQAKSAPVSDRQHGSHHHRPPARSMFAPELVKPALVAAFGKLSPRDQLRNPVMFVA YVGSILTTILFLKAMAAPAAAPGGESAGFILAVSVWLWFTVLFANFAEALAEGRSKQQAEALRGLKTTVTARVLKDGKRG SATEARPATALRRGDVVLVQAGEMIPGDGEVIDGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVARITTNP GESFIDRMITMVEGAKRQKTPNELALTILLVGLTIVLLLATATLQPFSLYSVLVAKAGVPVTITVLVALLVCLIPTTIGG LLSAIGVAGMSRMMEANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFIPAPGVSPLQLAEAAWLSSLADETPEG RSIITLARQLPGLAAPVMASLKPEFVPFSAQTRMSGVDLSDGGGERHVRKGAADAVRRYVTERAGKFPDAVLQAVDEVAR AGSTPLVVADANGGSVRVLGVIELKDIVKTGIRERFGELRKMGIKTVMITGDNRLTAASIAAEAGVDDFLAEATPEAKLK LIRQYQADGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSVA NDIAKYFAIIPAAFATTYPQLNLLNVMGLATPASAIMSAVIFNALIIVVLIPLALKGVVYRPLGAAVLLRRNLLVYGLGG ILVPFAGIKLIDMILALFGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-162 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-162 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-138 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-138 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 54 |
