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Name : fliP (H16_B0563) Accession : YP_728725.1 Strain : Genome accession: NC_008314 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 633958 - 634743 bp Length : 786 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAATTCCCCGCGTGCCGCGCTGCGGCGCCCGCTGCCGGGCCCGCTGCTGTCCCTGCTCGCGCTGATGCTGGCCATTGC CGCGCTGGCGCCCGCGCCGGCCTGGGCCCAGGCACTGCCCGGCGTCATCAGCAAGCCCGCCCCGGGCGGCGGCCAGATCT GGTCGCTGCCGGTACAGACGCTGGTGCTGCTGACCTCGCTGTCGTTCCTGCCTGCGGCGATGCTGCTGATGACCGGCTTC ACCCGCATCATCATCGTGCTGGGCCTGCTGCGCAGCGCACTGGGCACCGCCACCTCGCCGCCCAACCAGGTGCTGGTGGG CCTGTCGCTGTTCCTGACCTTCTTCGTGATGGCACCGGTGTTCGACCGTGTCTACAACGACGCCTACAAGCCGCTGTCGG AAAACAAGATCAGCCTGGAAGCCGCCGCGGCCAAGGCCGCGGAGCCGCTCAAGGCCTTCATGCTGCGCCAGACCCGCGAG AAAGACCTGGCCATGTTCGCGCAGATGGCCAAGGCGCCTGAGATGCAGGGCCCCGAGGAAGTGCCGCTCAGCATCCTGGT GCCGGCCTTCGTCACCAGCGAGTTGAAGACCGCGTTCCAGATCGGCTTCACCATCTTCATCCCGTTCCTGATCATCGACC TGGTCGTCGCCAGCGTGCTGATGGCGATGGGGATGATGATGGTGCCGCCGGCCACCATCTCGCTGCCGTTCAAGCTGATG CTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGCTCGGTTCGCTGGCGCAGAGCTTCATGAACTGA Protein sequence : MNSPRAALRRPLPGPLLSLLALMLAIAALAPAPAWAQALPGVISKPAPGGGQIWSLPVQTLVLLTSLSFLPAAMLLMTGF TRIIIVLGLLRSALGTATSPPNQVLVGLSLFLTFFVMAPVFDRVYNDAYKPLSENKISLEAAAAKAAEPLKAFMLRQTRE KDLAMFAQMAKAPEMQGPEEVPLSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPFKLM LFVLVDGWQLLLGSLAQSFMN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 8e-25 | 44 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 8e-25 | 44 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 8e-25 | 44 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 7e-27 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 7e-28 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-27 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-27 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 1e-17 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 1e-17 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-76 | 76 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 6e-72 | 75 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 4e-58 | 61 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-53 | 55 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 1e-28 | 43 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 4e-28 | 41 |
| fliP | YP_728725.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 6e-27 | 41 |
