Gene Information

Name : copR (H16_B2186)
Accession : YP_841698.1
Strain :
Genome accession: NC_008314
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2474861 - 2475556 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
GTGAAACTGCTAGTGGTGGAGGACGAGTCCAAGACCGGCGAATACCTGCGCCAGGGGCTGACCGAGGCGGGCTTTGTCGT
CGACCTGGTGGCCAACGGGCTGGACGGCCAGCATCTGGCGATGACCGAGCCCTATGACCTGGTCATCCTGGACGTGATGC
TGCCGGACGTAGATGGCTGGCGCATCGTGCAGGCGCTGCGCGCGGCGGAGATCGCCGTGCCGGTGCTGTTCCTGACCGCG
CGCGACAGCGTGGCCGACCGCGTCAAGGGGCTGGAGCTGGGTGCGGACGACTACCTGGTCAAGCCCTTCGCCTTTTCCGA
GCTGCTCGCGCGGGTGCGCACGCTGCTGCGCCGGGGCACGGCGCAGATGGCGCTGGACCGCATCCAGGTGGCCGACCTGG
TGCTGGACCTGGGCCGCCGCCGGGCCACGCGCGCCGGGCGCCGCATCACGCTGACCAGCAAGGAGTTCGCCTTGCTGGAA
CTGCTGGCGCGCCGCCGCGGCGAAGTGCTGCCGCGCTCCTTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
CAGCAATGTCATCGACGTCGCCATCCGGCGCCTGCGCGCGAAGATCGACGATGAGTTCGAGCCCAAGCTGATCCAGACCG
TGCGCGGCATGGGCTATGTGCTGGAAGCCCCCGAGGCAGCGGAGAACGCTGAATGA

Protein sequence : 
MKLLVVEDESKTGEYLRQGLTEAGFVVDLVANGLDGQHLAMTEPYDLVILDVMLPDVDGWRIVQALRAAEIAVPVLFLTA
RDSVADRVKGLELGADDYLVKPFAFSELLARVRTLLRRGTAQMALDRIQVADLVLDLGRRRATRAGRRITLTSKEFALLE
LLARRRGEVLPRSLIASQVWDMNFDSDSNVIDVAIRRLRAKIDDEFEPKLIQTVRGMGYVLEAPEAAENAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-52 59
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-51 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_841698.1 response regulator BAC0111 Protein 5e-67 72
copR YP_841698.1 response regulator BAC0083 Protein 1e-60 71
copR YP_841698.1 response regulator BAC0638 Protein 3e-63 69
copR YP_841698.1 response regulator BAC0197 Protein 2e-58 67
copR YP_841698.1 response regulator BAC0347 Protein 4e-57 65
copR YP_841698.1 response regulator BAC0308 Protein 8e-56 64
copR YP_841698.1 response regulator BAC0125 Protein 3e-54 62
copR YP_841698.1 response regulator BAC0487 Protein 2e-27 41
copR YP_841698.1 response regulator NC_007622.3794948.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_003923.1003417.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_013450.8614146.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_002951.3238224.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_007793.3914065.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_002758.1121390.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_010079.5776364.p0 Protein 5e-29 41
copR YP_841698.1 response regulator NC_002952.2859858.p0 Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_841698.1 response regulator VFG0596 Protein 2e-52 59
copR YP_841698.1 response regulator VFG1389 Protein 1e-27 46
copR YP_841698.1 response regulator VFG1390 Protein 5e-35 45
copR YP_841698.1 response regulator VFG1386 Protein 3e-27 42