Gene Information

Name : betB (H16_B2130)
Accession : YP_841642.1
Strain :
Genome accession: NC_008314
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 2409453 - 2410919 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGATCCTGACCCAGCTCTATATCGACGGCCAGTGGCAGTCGCCCATCGACCAAGGCACGCGCGCCATCCTGAGCCCGGC
CGACGAGTCCGTGATCGCCCAGGCAGCCGAAGCCACCCGCGCCGACGCGCGCCTGGCCATCGCCGCTGCGCGCAAGGCCT
TCGACGGCCCGTGGCGCCAGACGACGATCCGTGACCGCGCCAGGCTGCTGAACAAGATCGCCGAACTGATTGACCGCGAT
GCCGAGAAGCTCGCCCGACTGGAGTCGCTCAACACCGGCAAGACGCTGACCGAGAGCCGCACCGACATGGGCGATATCGC
CGCCACCTTCCGCTACTTTGCGGGGCTGGTCGCATCCGAGTCGGGCGCCGTCAACGAAGCCCCGCACCATGTGATCAGCC
GCACCCTGCGCGAGCCGGTTGGCGTGTGCGGCCTGATCACGCCGTGGAACTACCCGCTGCTGCAGGCCGCGTGGAAGATC
GCGCCCGCGCTGGGCGCCGGCAATACCGTGGTGATCAAACCCAGCAACCTGACGCCGCTGACCACGCACCACTTCACGCA
ACTGGTGGCCGAGCTGGACCTGCCGCCGGGCGTGTTCAACCTGGTGACCGGCGGCGCCGAAGTCGGTGCCGAACTGGCCG
AGAGCCTGGACGTGGACCTGGTGTCCTTCACCGGCGGCGCCTATGCCGGCGAAAGCATCATGAAGGCCGCCACCGGCAAC
TTCAAGCGCATCGGCCTGGAGCTGGGCGGCAAGAACCCGAACATCGTGTTTGCCGATGCCGACCTGGACGCAGCGGTCGA
CTACGCGCTCAATGCCGCGTTCTTCCACGCCGGGCAGGTCTGCTCCGCCGGCTCGCGCCTGATGATCGAGGACGGCATCT
ATGATGCATTCATCAGCCGGCTGGCCGAGCGCCTGCCGCGCATCGTGATCGGCAACGGCTTCCACGGCGAGACCCAGATG
GGCCCGGTGCAGTCGGCGCAACAGCACGAGAAGATCCTGGGCATGGTGCAGGCCGGCATTGCCGAGGGTGCACGGCTGGT
CCACGGCGGCAAGCGGCCGGCTGGCGACGTCTTCAAGACGGGCTACTGGCTGGAACCGACGCTGCTGGCCGACGTGACGG
CAGACATGAAAATTGCGAAGGAGGAGATTTTCGGGCCGGTGATCACGGCCGAGCGCTTCCGCTCCGAGGAAGAGGTGCTG
CGTGCCGCCAACGACACCCCGTACGGCCTGGCCGGCGCGGTCTGGACCCGCGACCTGGACAAGGCCAACCGGATGTCGCG
CGGGCTGCGCTTCGGCACGGTGTGGGTCAACGACTACCACCCGTACTTCCCGGAAGCGCCGTGGGGCGGCTACAAGGCGA
GCGGCATCGGCCGCGAGCTGGCCCGCATCGGCCTGGACGAGTACACCGAACTCAAGCACAGCTATATCAACCTGGCCCCC
AAGGCGATGGGCTGGTTCGGCGCCTGA

Protein sequence :
MILTQLYIDGQWQSPIDQGTRAILSPADESVIAQAAEATRADARLAIAAARKAFDGPWRQTTIRDRARLLNKIAELIDRD
AEKLARLESLNTGKTLTESRTDMGDIAATFRYFAGLVASESGAVNEAPHHVISRTLREPVGVCGLITPWNYPLLQAAWKI
APALGAGNTVVIKPSNLTPLTTHHFTQLVAELDLPPGVFNLVTGGAEVGAELAESLDVDLVSFTGGAYAGESIMKAATGN
FKRIGLELGGKNPNIVFADADLDAAVDYALNAAFFHAGQVCSAGSRLMIEDGIYDAFISRLAERLPRIVIGNGFHGETQM
GPVQSAQQHEKILGMVQAGIAEGARLVHGGKRPAGDVFKTGYWLEPTLLADVTADMKIAKEEIFGPVITAERFRSEEEVL
RAANDTPYGLAGAVWTRDLDKANRMSRGLRFGTVWVNDYHPYFPEAPWGGYKASGIGRELARIGLDEYTELKHSYINLAP
KAMGWFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-78 42
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 2e-70 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-78 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
betB YP_841642.1 betaine-aldehyde dehydrogenase VFG0082 Protein 8e-79 42