Gene Information

Name : fimB (H16_B2091)
Accession : YP_841603.1
Strain :
Genome accession: NC_008314
Putative virulence/resistance : Virulence
Product : fimbrial assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2357161 - 2357931 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACGTCCATCAAGTCCCTGATTTCCGCCGGCGTGATTGCGCTGGGGCTCATGAGCGCGCTGCACGCGCAAGCTTC
CGTGGTCATAGCGGGCACGCGGGTCATCTACAAGGCAAAAGACACCGAGACCACGATCAAGCTGACCAACGAAGGTCAGT
CGCCGGCGTTGACGCAGGCGTGGATCGACAAGGGCGACGCGAAGGCTGCGCCGTCGTCCATCGACGTACCGTTCACCGTG
ACGCCGCCGGTGTCGCGCATCGACCCGAAAAAGGGCCAGACGCTGCGCATCATCTACACCGGCGAGCCACTGCCGCAGGA
CCGCGAATCCGTGTTCTGGCTCAATGTGCTGGAGATCCCGCCAAAGCCCACCGCCGAAGAAGCCGATGTCAACAAGCTGC
AGCTGGCTTTCCGCTCGCGCATCAAGCTTTTCTTCCGCCCCGCGGGCCTGGAGGGCAACGCCGACGACGCCCCTGGCAGC
ATCAGCTGGCGCGTCACCCATGCAGGCGGCAAGCCGGCGCTTGAGGCAAGCAACCCCAGCAAGTATCACGTTTCTTTCGC
CAACCTCGAACTGGTTGGCGGCGGCAAGACCGCGAAGTTTGAAGAAGGCGGCATGGTCGGCCCGGGCGAAGCCAAAACGT
TCCCGCTGACCGGCGATGTTGCGCAAGGCACCGAAGCCAGGGTTCGCTACAAGGCCATCAATGACTACGGCGGCGCCGTA
AGCGGCGAAGCCGCACTGGGCAGCAGCGCCACCAAGGCCGCTTCGCGCTGA

Protein sequence :
MKTSIKSLISAGVIALGLMSALHAQASVVIAGTRVIYKAKDTETTIKLTNEGQSPALTQAWIDKGDAKAAPSSIDVPFTV
TPPVSRIDPKKGQTLRIIYTGEPLPQDRESVFWLNVLEIPPKPTAEEADVNKLQLAFRSRIKLFFRPAGLEGNADDAPGS
ISWRVTHAGGKPALEASNPSKYHVSFANLELVGGGKTAKFEEGGMVGPGEAKTFPLTGDVAQGTEARVRYKAINDYGGAV
SGEAALGSSATKAASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-44 45
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 8e-54 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimB YP_841603.1 fimbrial assembly chaperone VFG0007 Protein 2e-44 48
fimB YP_841603.1 fimbrial assembly chaperone VFG1468 Protein 1e-44 45