Gene Information

Name : H16_B1337 (H16_B1337)
Accession : YP_840857.1
Strain :
Genome accession: NC_008314
Putative virulence/resistance : Resistance
Product : SSS family APC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1482677 - 1484248 bp
Length : 1572 bp
Strand : +
Note : 14 TMHs

DNA sequence :
ATGAATCTCCAGGCCATTTCCATGTTCCTGCTCTTCGTCGCGCTGACGCTGGGCATCACGTACCGGGCCTCCTCGCGCAC
CCGGACCGCCAATGACTTCTTTACCGCAGGCGGCGGCATCACCGGCATGCAGAACGGCCTGGCCGTGGCGGGCGACTACA
TGTCGGCGGCCACGCTGCTCGGCGTGGTCAGCCTGGTCTATGCGCGCGGCTTTGACGGCCTGCTGTATATCGTCGGGTTC
TTCATCGGCTGGCCGGTCATGCTGTTCCTGATGGCCGAACGACTGCGTAATCTCGGCAAATTCACCTTCGTCGACATTAT
TTCGGACCGGCTCGATCCCGTCAGCACGCGCTGCATTGCAGCGGCCAGTAGCTTGGTGGTGGTGCTGCTCTACCTGATCG
TGCAAATGGTCGGCGCCGGCGAGTTGGTGCAGTTGTTGTTCGGCATCGACTATGTCTATGCCGTCATCGGGGTCGGCGTG
CTGATGATGATCTATGTGACTGTTGGCGGCATGATCGCGACGACATGGGTGCAGATCGTCAAGGCAGTGCTGCTGCTGTT
CGGCGGCTCGTTGCTGATGCTCCTGGCGCTGGGGCATTTCGGCTTCAGCCTTGAAGCGCTGGCTGCCAGGGCAATCGCGG
TGCACCGCAGCGGCCCCGCCCTGCTCGCGCCGGGCACGCTGTTCGCCGATCCGGTCTCGGCGCTCTCGCTGTGTGTGGCC
ACCGTGCTCGGGCTGTCGGGACTCCCGCATATCCTGATGCGCTTCTTTACGGTGCCGAATGCGTGCGAAGCACGCAAGAG
CGTGCTGGTAGCCAGCACCTGCATCGGTTACATGTTCCTCGCCATGTTTGCCATCGGACTTGCGGCCATCGTGATCGTCG
GTACCGATCCACGCTATTTTGAAGGCGGCCATGTCGGCGGAAAGCTGCTCGGCGGTGGCAACATGGTCGCGATGCACCTG
GCCAGCGCGACCGGCGGCAACCTGTTCCTCGGGTTCCTGGCGGCCGTCGCCTTTGCCACGATTCTCGCCGTGGTGTCGGG
CCTGACGCTGGCCGGTGCTTCGGCGATCTCGCACGACATCTACGCCGGTGTCCTACGGCGCGGCACTACCACCGAGGCAG
CCGAGATCGCCGTCACCAAAAAAGCCACGCTGGCCATCGGCATCGTTGCGGTGCTGCTGGGGATTGCCTTCAAAGGGCAG
AACCTGGCGTTCCTGGTCGCGCTGGCTTTCAATGTAGCGGCCTCGGCGAATTTCCCGGTGTTGGTGCTGTCGATGTACTG
GCGCGGCCTGACCAGCCGCGGCGCGGTCTGGGGCGTGGCGTCGGGCCTGGCGTCGTCGGTCGCGCTGGTGGTACTTTCCC
CTGCCGTCTGGAAGAACGTGCTGGGGCACCCCTCAGCCATCTTTCCGTACGACCACCCGGCGCTGTTCACAGTCCCGCTC
GCGTTCCTGGTCACATACCTGTGCTCGCGCTTCGACCGGAGCGCCAGGGCCGAGGCAGAGCGCCAGGCCTTCGACGCGCA
ACTGGTCCGCGCACAGACCGGCCATGGGGCGGCGGCACCATCCAGCCACTGA

Protein sequence :
MNLQAISMFLLFVALTLGITYRASSRTRTANDFFTAGGGITGMQNGLAVAGDYMSAATLLGVVSLVYARGFDGLLYIVGF
FIGWPVMLFLMAERLRNLGKFTFVDIISDRLDPVSTRCIAAASSLVVVLLYLIVQMVGAGELVQLLFGIDYVYAVIGVGV
LMMIYVTVGGMIATTWVQIVKAVLLLFGGSLLMLLALGHFGFSLEALAARAIAVHRSGPALLAPGTLFADPVSALSLCVA
TVLGLSGLPHILMRFFTVPNACEARKSVLVASTCIGYMFLAMFAIGLAAIVIVGTDPRYFEGGHVGGKLLGGGNMVAMHL
ASATGGNLFLGFLAAVAFATILAVVSGLTLAGASAISHDIYAGVLRRGTTTEAAEIAVTKKATLAIGIVAVLLGIAFKGQ
NLAFLVALAFNVAASANFPVLVLSMYWRGLTSRGAVWGVASGLASSVALVVLSPAVWKNVLGHPSAIFPYDHPALFTVPL
AFLVTYLCSRFDRSARAEAERQAFDAQLVRAQTGHGAAAPSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 9e-110 62
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 5e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H16_B1337 YP_840857.1 SSS family APC transporter BAC0564 Protein 1e-102 57
H16_B1337 YP_840857.1 SSS family APC transporter BAC0570 Protein 5e-96 56