Gene Information

Name : h16_A0543 (H16_A0543)
Accession : YP_725060.1
Strain :
Genome accession: NC_008313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 570559 - 571248 bp
Length : 690 bp
Strand : -
Note : REC (residues 3 to 115, 8e-25) with a complete phosphorylation pocket (DD-D48-S79-K96)

DNA sequence : 
ATGCGCATTCTGATCGCCGAAGATGACGACGTGCTGGCGGACGGCCTGACGCGCTCGCTACGCCACTCGGGTTACGCCGT
CGACCACGTCACCAACGGCCTGGAAGCCGATTCCGCGCTGTCGACCCAGACCTTCGACCTGCTGATCCTGGACCTGGGCC
TGCCGCGCATGTCCGGGCTGGAAGTGCTCAAGCGCCTGCGCGCGCGCGGCGCCATGCTGCCGGTGCTGATCCTGACCGCC
GCCGACAGCGTCGACGAGCGCGTCAAGGGCCTGGACCTGGGCGCCGACGACTATATGGCCAAGCCCTTTGCCCTGTCCGA
GCTTGAAGCGCGCGTGCGCGCGCTGGTGCGGCGCGGCGCCGGCGGCGGCGCCACGCTGATGCGGCACGGGCCGCTGGCCT
ACGACCAGGTCGGACGCATCGCCTATCTCAACGAGCAGATGCTGGACCTGTCCGCGCGCGAGATCGGGTTGCTGGAGATC
CTGCTCACACGCAGCGGCCGCCTGGTATCGAAAGAGCAGCTGGTGGACCACCTGTGCGAGTGGGGCGAGGAAGTCAGCAA
CAACGCCATCGAAGTCTACGTGCACCGGCTGCGCAAGAAGATCGAAGTCGGCGGCATCCGCATCGCCACCGTGCGCGGGC
TTGGCTACTGCCTGGAGAAATTCCAGCCGGCGGTGGCCACGCATCACTGA

Protein sequence : 
MRILIAEDDDVLADGLTRSLRHSGYAVDHVTNGLEADSALSTQTFDLLILDLGLPRMSGLEVLKRLRARGAMLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALSELEARVRALVRRGAGGGATLMRHGPLAYDQVGRIAYLNEQMLDLSAREIGLLEI
LLTRSGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGIRIATVRGLGYCLEKFQPAVATHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
h16_A0543 YP_725060.1 response regulator BAC0487 Protein 1e-29 45
h16_A0543 YP_725060.1 response regulator NC_002516.2.879194.p Protein 7e-25 44
h16_A0543 YP_725060.1 response regulator BAC0083 Protein 8e-29 42
h16_A0543 YP_725060.1 response regulator BAC0308 Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
h16_A0543 YP_725060.1 response regulator VFG0473 Protein 5e-33 45
h16_A0543 YP_725060.1 response regulator VFG1390 Protein 1e-30 42