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Name : gspE (H16_A3544) Accession : YP_727971.1 Strain : Genome accession: NC_008313 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3815620 - 3817173 bp Length : 1554 bp Strand : + Note : - DNA sequence : ATGGCCAGCGAAGTCCAAACTGCCCTGCCCGCCGGCACCAGCGCGCCGGCCGAGACCCTGGAGCCGCCCTCGCCGATGGC GGCGCGGCTGGTCTCGTACGGCTTTGCGCGCGAGGCGCCGCTGCTGGTCGCGCACCAGCGCCCTGACGGACTGGAAGTCT GGGTGACCCGCGCCACCTCTCCGACCGCGCTGGCCGAGGTCGCGCGCGTGCATGGCGCGCTGCGCCTGCGCGTGCTGGAG CCCGACGCGCTGGAGCGCGCCATGGCCGATGCCTACAACCGCCAGGACGCCGGCAGCGCCGCGCAGGTGGTGGGCGAGGT CGAAGGCGAAGTCGACCTGTCGCGCCTGATGCAGGACATCCCGGCGGTGGAGGACCTGCTTGAATCCGAGGACGACGCGC CGATCATCCGCATGATCAATGCGCTGCTGACACAGGCCGCGCGCGAAGGCGCCTCGGATATCCATATCGAGCCGTTCGAG TCGTCGTCGGTGGTGCGCTTCCGCGTCGACGGCACGCTGCGCGACGTGGTGCGGCCGAAAAAGGCGCTGCACGGCGCGCT GATCTCGCGCATCAAGATCATGGCGCAGCTCGACATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCG TGGGCGGGCGCCCGGTCGACGTGCGGGTCTCGACCCTGCCCACCGGCCATGGCGAGCGCGCGGTGCTGCGCCTGCTGGAC AAGGAAGCAGGCCGGCTCGACCTGGCCAAGCTGGGCATGGCGCCCGGCACGCTGCGCGGCTTCGACCACCTGATCCGCCA GCCGCACGGCATCGTGCTGGTGACCGGGCCGACCGGCTCGGGCAAGACCACCACGCTGTATGCGGCGCTGTCGCGGCTGG ATGCGCGCACCACCAACATCATGACGGTCGAAGACCCGATCGAGTACGACCTGGACGGCATCGGCCAGACCCAGGTCAAC GCGCGCATCGACATGACCTTCGGCAAGGCTCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTCATGATCGGCGAAAT CCGCGACCTGGAAACCGCGCAGATCGCGGTGCAGGCCTCGCTGACCGGCCACCTGGTGCTGGCCACGCTGCACACCAACG ACTCGGCCTCGGCGGTGACGCGGCTGGTCGACATGGGGATCGAGCCGTTCCTGCTGTCGTCGTCGCTGCTGGGCGTGCTG GCGCAGCGGCTGGTACGCCGCCTGTGCCAGCACTGCAAGCGCGAGGAAGTGATCGAGGTCACTGCCGCCGAGGCCGAGGT GCTGCACGCGCAGGGCAAGCCGCTGCAGACCGTGTGGCACCCGGTGGGCTGCGACAAGTGCGGCCAGTCCGGGTACCAGG GGCGCATGGGCGTCTATGAGCTGCTGACCGTCGGTGACGAGATCCGCACCATGATCCACCGGCAGGCGCCGGAGTCCGAG ATCAAGCAGGTGGCGCTGGCGCACGGCATGCACACCATGCGCGGCGACGCGCAGCGCTGGATCGACAGCGGCGCGACCTC GCTTGAGGAAGTGCTGCGCGTGACGCGCGACTAA Protein sequence : MASEVQTALPAGTSAPAETLEPPSPMAARLVSYGFAREAPLLVAHQRPDGLEVWVTRATSPTALAEVARVHGALRLRVLE PDALERAMADAYNRQDAGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFE SSSVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLD KEAGRLDLAKLGMAPGTLRGFDHLIRQPHGIVLVTGPTGSGKTTTLYAALSRLDARTTNIMTVEDPIEYDLDGIGQTQVN ARIDMTFGKALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLVDMGIEPFLLSSSLLGVL AQRLVRRLCQHCKREEVIEVTAAEAEVLHAQGKPLQTVWHPVGCDKCGQSGYQGRMGVYELLTVGDEIRTMIHRQAPESE IKQVALAHGMHTMRGDAQRWIDSGATSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-115 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-115 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_727971.1 | general secretion pathway protein E | VFG0182 | Protein | 7e-126 | 57 |
| gspE | YP_727971.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-121 | 52 |
| gspE | YP_727971.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-114 | 50 |
| gspE | YP_727971.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-78 | 46 |
| gspE | YP_727971.1 | general secretion pathway protein E | VFG0112 | Protein | 1e-83 | 45 |
