Gene Information

Name : dsbD (H16_A3455)
Accession : YP_727891.1
Strain :
Genome accession: NC_008313
Putative virulence/resistance : Unknown
Product : Thiol:disulfide interchange protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG4232
EC number : -
Position : 3736133 - 3738031 bp
Length : 1899 bp
Strand : -
Note : 8 TMHs

DNA sequence :
ATGACAATCGGTTTGGCACTTCCGGAGCGCGCGCGCGGGCAGGTCTGGGCGCGGCATATTGCCGCAGCGCTGCTGGCGGC
ATTGGCCTGGGTGTGCCTGGCGGGCGGCGCGCATGCCGCCACCGAAGACGACTTCCTGCCGCCGGAGCAGGCCTTCCGCT
TCGCCGCGAGCCAGCTTGACGACAAGACTGTCGAGGTGCGCTTCGAGGTTGCCCCCGGCTACTACATGTACCGCGAGCGC
TTCGCCTTTGCCGCGCAACCCGCCGACGTGAAGCTGGGAATGCCGGCGTATCCGCCGGGCAAGGTCAAGTTCGACGAGAC
CTTCGGCAAGGAGATGGAGACCTACCGCGACAGCGTGGTCATCCGCGTGCCGGTGGAGGCGGCGCCGGCCGACGGCAAGT
GGTCGCTGACGGTCACCTCGCAGGGCTGCGCCGACAAGGGCCTGTGCTATCCGCCGATGGAGAGCGTGTACAAGGTCGGC
GGCAGCGGGCTGGCCGACCTGTTCGGCAAGCGCGGGCGCTCGGATGCGCCGGCGGCCGTGCCTGCCCCTGCGCCAGCCGC
CCCCGCGGTGCTGCGCGCCGACGACAGCGACCGCATCGCCGGCGCGCTGGCGAGCCGCAACCTGGCCCTGATCGCCGCAC
TGTTCTTCGGCCTGGGCCTGCTGCTGACGTTCACTCCATGCGTGCTGCCGATGGTGCCGATCCTGTCCTCGATCGTGGTG
GGCGAGCACGTCACGCGCGGCCGTGCGCTGGTGGTGTCGCTGGCCTACGTGCTGGGCATGGCGGTGGTGTACACCGCGGT
CGGCGTGGCTGCCGGGCTGCTGGGCGAGGGCCTGTCGGCCGCGCTGCAGACACCGTGGGTGCTGGGCCTGTTCGCAGCGC
TGATGGTGGCCCTGGCGCTGTCGATGTTCGGGCTGTACGAGCTGCAACTGCCGCAGCGCTGGCAGACCCGCCTGACCGAA
TCGTCGCACCGCCGCCAGGGCGGCCAGGTGGCGGGTGCGGCGGCAATGGGCGCGATCTCGGCGCTGATCGTCGGGCCCTG
CGTCACCGCGCCGCTGGCCGGGGCGCTGGCCTATATCGCGCAATCCCGCGACGCCGTGATCGGCGGCGCGGCGCTGTTCG
CCATGGCGCTCGGCATGGGCGTGCCGCTGGTGCTGGTGGGCGTGGGCGCGGGCAACCTGCTGCCGCGGGCCGGGCGCTGG
ATGGAGGTCACCAAGCGCTTCTTCGGCTTCCTGCTGCTGGGCGTGGCGCTGTGGATGCTGGGGCCGGTGCTGCCGGCCTG
GGCCTCGATGCTGGCGCTGGCGGCGCTGCTGCTGGTGGCGGCGGTGTTCCTGGGCGCCTTTGACGGCCTGGGCCCGGATC
CGCGCAACCTGGCGCGGGTGGGCAAGGGCGTGGGCGTGCTGTTTGCGATCGCAGCGGCGATCGTGCTGATTGGCGTGGCC
TCGGGCGGGCGCGATCCGCTGCAGCCGCTGTCGCACCTGAGCGTGGCACGCGGTGGCGCGGAAGCCGCTGCCGGCGCACA
GGCGGTGCGCTTCGAGCGCGTGCGCAGCGTGGCCGAGCTCGATGCCCGCGTGGCGCAGGCCGCCGCCGCAGGCAAGCCGG
TGCTGCTGGATTTCTACGCCGACTGGTGCGTCAGCTGCAAGGAAATGGAGCGCATGACCTTCGTCGATCCGCGCGTGCGC
GCGCGGCTGTCCGAGATCGTGCTGCTGCAGGCGGACGTGACCGCCAACAATGCCGACGACAAGGCGCTGCTCAAGCGCTT
CGGCCTGTTCGGGCCGCCCGGCATCATCCTGTTCGGGCCTGACGGGCGCGAGCGCCCGGTGCGCGTGATCGGCTACCAGT
CGGCCAACCGCTTCCTGGAAAGCCTGGAGCGGGCCTTCGGCACGCGTACCAGCACCTGA

Protein sequence :
MTIGLALPERARGQVWARHIAAALLAALAWVCLAGGAHAATEDDFLPPEQAFRFAASQLDDKTVEVRFEVAPGYYMYRER
FAFAAQPADVKLGMPAYPPGKVKFDETFGKEMETYRDSVVIRVPVEAAPADGKWSLTVTSQGCADKGLCYPPMESVYKVG
GSGLADLFGKRGRSDAPAAVPAPAPAAPAVLRADDSDRIAGALASRNLALIAALFFGLGLLLTFTPCVLPMVPILSSIVV
GEHVTRGRALVVSLAYVLGMAVVYTAVGVAAGLLGEGLSAALQTPWVLGLFAALMVALALSMFGLYELQLPQRWQTRLTE
SSHRRQGGQVAGAAAMGAISALIVGPCVTAPLAGALAYIAQSRDAVIGGAALFAMALGMGVPLVLVGVGAGNLLPRAGRW
MEVTKRFFGFLLLGVALWMLGPVLPAWASMLALAALLLVAAVFLGAFDGLGPDPRNLARVGKGVGVLFAIAAAIVLIGVA
SGGRDPLQPLSHLSVARGGAEAAAGAQAVRFERVRSVAELDARVAQAAAAGKPVLLDFYADWCVSCKEMERMTFVDPRVR
ARLSEIVLLQADVTANNADDKALLKRFGLFGPPGIILFGPDGRERPVRVIGYQSANRFLESLERAFGTRTST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dsbD AAN62102.1 putative thiol:disulfide interchange protein Not tested PAGI-2(C) Protein 1e-53 42