Gene Information

Name : czrR (H16_A2167)
Accession : YP_726632.1
Strain :
Genome accession: NC_008313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2359683 - 2360366 bp
Length : 684 bp
Strand : +
Note : REC (residues 3 to 113, 4e-24) with a typical phosphorylation pocket (1/2 DD,D54,S/T82,K105)

DNA sequence : 
ATGAAACTCTTGCTGGTCGAAGATGAGATCAAGACGGTCGATTACCTGCGCCGCGGCCTGTCCGAGAATGGCTACGTAGT
CGATACCGCGCACAACGGCGTGGACGGCCTGCACCTGGCCTGTACCGAGCCCTACGACGCGATCGTGCTCGACGTGATGC
TGCCCGCGCTGGATGGCGTCTCGGTGCTGAAGTCCCTGCGCCGCGAGCAGCAGACCCCGGTGCTGATGCTGACCGCGCGC
GACGACCTGGATGACCGCCTCAATGCCTTCGATGCCGGCGCCGACGACTACCTGTCCAAGCCCTTCTCTTTTCTGGAGCT
GCTGGCGCGGCTCAACGTGCTGACGCGGCGCGGCCGGCAGACTGAGCCGTCGCAGCTGACCGTGGGCGATCTGCGCATCG
ACCTGCTGTCGCGGCGCGCCACGCGCGGCACGCGGCGCCTGGAACTGAGCGCACGCGAATTCACGCTGTTGTCGGTGCTG
GCCAGGCGGCAGGCGCAGATCGTGTCCAAGACCGCGATCACGGAACTGGTCTGGGACATCTCGTTCGACTGCAACACCAA
CGTGGTCGAAGTTGCGGTCAAGCGTTTGCGCGCCAAGCTGGACTGGCCCGGCGAAGCCAAGCTGCTGCATACCATCCGCG
GCATGGGTTACGTGCTGGAGCACCGCGACGGATTGAGCGCATGA

Protein sequence : 
MKLLLVEDEIKTVDYLRRGLSENGYVVDTAHNGVDGLHLACTEPYDAIVLDVMLPALDGVSVLKSLRREQQTPVLMLTAR
DDLDDRLNAFDAGADDYLSKPFSFLELLARLNVLTRRGRQTEPSQLTVGDLRIDLLSRRATRGTRRLELSAREFTLLSVL
ARRQAQIVSKTAITELVWDISFDCNTNVVEVAVKRLRAKLDWPGEAKLLHTIRGMGYVLEHRDGLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-49 51
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-48 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czrR YP_726632.1 response regulator BAC0125 Protein 2e-58 55
czrR YP_726632.1 response regulator BAC0083 Protein 4e-54 55
czrR YP_726632.1 response regulator BAC0197 Protein 6e-56 53
czrR YP_726632.1 response regulator BAC0111 Protein 4e-53 50
czrR YP_726632.1 response regulator BAC0638 Protein 7e-46 50
czrR YP_726632.1 response regulator BAC0347 Protein 3e-48 47
czrR YP_726632.1 response regulator BAC0308 Protein 5e-49 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czrR YP_726632.1 response regulator VFG0596 Protein 8e-50 51
czrR YP_726632.1 response regulator VFG1389 Protein 3e-38 45
czrR YP_726632.1 response regulator VFG1390 Protein 1e-41 44
czrR YP_726632.1 response regulator VFG1386 Protein 9e-33 41