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Name : h16_A1818 (H16_A1818) Accession : YP_726290.1 Strain : Genome accession: NC_008313 Putative virulence/resistance : Virulence Product : response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1980146 - 1980844 bp Length : 699 bp Strand : + Note : REC (residues 5 to 117, 5e-26) with a complete phosphorylation pocket (DD-D55-T96-K108) DNA sequence : ATGTCGCGCCAGGTTCTGGTGATCGAGGACGACGCAGATATCGCCGAACTGGTACGGCTGCAGGTGAGCGGGCTGTCTTG CGACGTGAAGGTGATCAACCACGGCAGGGCGGGACTGGAAGAGGCGCTGAGTCGTCCCTATGACCTGGTCATCCTGGACC TGATGCTGCCGGGCGCCGACGGGCTGGAAATCTGTCGGCGCCTGCGCGCGGAACCGCGCTATACCCCCATCCTCATGCTC ACGGCGCGCTCGACTGAACTGGACCGGGTGCTGGGACTGGAGATGGGCGCCGACGACTACCTGACCAAGCCGTTCAGCGT CCTTGAGCTGACCGCGCGGGTCAAGGCGATCTTCCGGCTGGTCGACACCCTGGCCAACCCGCCATCCGATGGTCCCAGGA CGGTGCAGGTCAAGGCCCTGCACATCGATATCGACAAGCGTGAAGTGAGCGTGCGCGGCACGCCGATCTGCCTCACCGCC AAGGAATTCCAGCTGCTGCTCTACTTTGCCAGCAATCCGGGGCGCGTCTTCAGCCGCGCCCAGTTGCTGGACCAGGTCTG GGGCTATAGCCACAGTGGCTACGAGCACACGGTAAGTTCGCATATCAACCGGCTGCGCGCCAAGATCGAACTCGACCCCA ACGAGCCGGAGTACATCCAGACCGTCTGGGGCGTGGGCTACAAGTTCTGCAATACGTAA Protein sequence : MSRQVLVIEDDADIAELVRLQVSGLSCDVKVINHGRAGLEEALSRPYDLVILDLMLPGADGLEICRRLRAEPRYTPILML TARSTELDRVLGLEMGADDYLTKPFSVLELTARVKAIFRLVDTLANPPSDGPRTVQVKALHIDIDKREVSVRGTPICLTA KEFQLLLYFASNPGRVFSRAQLLDQVWGYSHSGYEHTVSSHINRLRAKIELDPNEPEYIQTVWGVGYKFCNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-50 | 51 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 2e-50 | 51 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-30 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 8e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| h16_A1818 | YP_726290.1 | response regulator | AE016830.1.gene1681. | Protein | 1e-47 | 46 |
| h16_A1818 | YP_726290.1 | response regulator | HE999704.1.gene2815. | Protein | 5e-47 | 45 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002951.3237708.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_003923.1003749.p0 | Protein | 5e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002758.1121668.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_009641.5332272.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_013450.8614421.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_007793.3914279.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002745.1124361.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_009782.5559369.p0 | Protein | 7e-43 | 43 |
| h16_A1818 | YP_726290.1 | response regulator | NC_010079.5776364.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002952.2859858.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_007622.3794948.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_003923.1003417.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_013450.8614146.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002951.3238224.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_007793.3914065.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002758.1121390.p0 | Protein | 6e-37 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | AE015929.1.gene1106. | Protein | 4e-33 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_012469.1.7686381. | Protein | 2e-44 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_002952.2859905.p0 | Protein | 9e-43 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | NC_007622.3794472.p0 | Protein | 1e-42 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | AE000516.2.gene3505. | Protein | 1e-38 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | HE999704.1.gene1528. | Protein | 3e-34 | 41 |
| h16_A1818 | YP_726290.1 | response regulator | AF155139.2.orf0.gene | Protein | 5e-40 | 41 |
| h16_A1818 | YP_726290.1 | response regulator | NC_012469.1.7685629. | Protein | 4e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| h16_A1818 | YP_726290.1 | response regulator | VFG1563 | Protein | 1e-50 | 51 |
| h16_A1818 | YP_726290.1 | response regulator | VFG1702 | Protein | 7e-51 | 51 |
| h16_A1818 | YP_726290.1 | response regulator | VFG0596 | Protein | 5e-31 | 42 |
| h16_A1818 | YP_726290.1 | response regulator | VFG1389 | Protein | 2e-26 | 41 |
