Gene Information

Name : h16_A0153 (H16_A0153)
Accession : YP_724673.1
Strain :
Genome accession: NC_008313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 167608 - 168240 bp
Length : 633 bp
Strand : +
Note : REC (residues 4 to 118, 3e-23) with a complete phosphorylation pocket (DD-D60-S94-K107)

DNA sequence :
ATGATCCGCATCCTGATCGCTGACGATCACGAGATTGTGCGTGCCGGGCTGCGCCAGTTCCTTTCCGAAGAGCCCGACAT
CCAGGTGACAGGCGAAGCCGGAAGCGGCGACCAGGTCATGGCGCAGTTGCGCGATGCCGAGTTCGACGTGCTGGTCCTGG
ACATCTCGATGCCCGACCGCAACGGCATCGACGTGCTCAAGCTGATCCGTCAGCGCAAGCCCGAATTGCCGGTCCTGATC
CTGTCGACCTACCCGGAAGACCAGTACGCGATCAACCTGATCCGTGCCGGCGCTTCTGGCTACCTGACCAAGGAAAGCGC
CCCGGACGACCTGGTCAAGGCCATCCGCACGGTGGCCCAGGGCCGCCGCTACGTGAGCGCCACCGTGGCCGACCTGCTGA
TCGGCGGGCTCGACAAGCCGACCGAGCAGCCGGTGCACCAGATGCTGTCGGAGCGCGAGTTCCAGATCTTCTGCAAGCTG
TCGCGGGGGCAGTCGGTGTCGGTGATTGCCGACGAACTGTTTCTCAGCGTCAAGACCGTCAGTACCTATCGTTCGCGCAT
TCTCGAGAAAATGGGCATGAAGACCAACGCTGACCTGACCTATTACGCCATCAAGAACGGCCTGGTCGAATAG

Protein sequence :
MIRILIADDHEIVRAGLRQFLSEEPDIQVTGEAGSGDQVMAQLRDAEFDVLVLDISMPDRNGIDVLKLIRQRKPELPVLI
LSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQGRRYVSATVADLLIGGLDKPTEQPVHQMLSEREFQIFCKL
SRGQSVSVIADELFLSVKTVSTYRSRILEKMGMKTNADLTYYAIKNGLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpY AAD24683.1 response regulator HrpY Virulence Hrp PAI Protein 3e-35 43
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 4e-34 41
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 4e-34 41