Gene Information

Name : h16_A1427 (H16_A1427)
Accession : YP_725930.1
Strain :
Genome accession: NC_008313
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1545882 - 1546553 bp
Length : 672 bp
Strand : +
Note : REC (residues 3 to 114, 1e-23) with a typical phosphorylation pocket (1/2 DD,D54,S/T82,K105)

DNA sequence : 
ATGAGAATCCTTATTGTTGAAGACGCCCCGATGCTGGGTGACGGGCTGCGGCGCGGCCTGCAGCTGCTCGACTATGCGGT
CGACTGGTTCAGCACCGGCACCGAAGCCGACCATGCGCTCGGCGTGGTCCACTACGATGCCGTGGTGCTGGACCTGGGCC
TGCCAGGGGAAGACGGCATGTCGCTGCTCGCGCGCTGGCGTGCGCGCGGCAGCCGCATCCCGGTGATCGTGCTGACCGCG
CGCGATGCGATCGACAGCCGCATCGGCGGCCTTGACGCCGGTGCCGACGACTACCTGGTCAAGCCGATCGCGCTCGATGA
GCTGGCGGCCCGGCTGCGTGCCGTGACCCGCCGCGCCGCGGGCCTGTCGTCTCCAGTGTGGAAGCACGGCGCGCTGGAAT
TCCATCCGGCCGCGCGCCAGGCGTACTGGCAGGGCAAGCCCCTGGAGCTGACCAGCCGCGAAGCCATGCTGCTGGAGCTG
CTGCTGGCGCACCCCAACCGGCTGCTGACGCGCGACTTCCTGCGCGACAAGCTCTACGACTGGCAGGGCGGCGTTGAAAG
CAACGCGCTGGAAGTCCATATCCACCACCTGCGCCGCAAGATCCATCCGAAGATCGTGCGCACCTTCCGCGGCGCCGGCT
ACACGCTGGGCGCGGCCGAGGATTGCACATGA

Protein sequence : 
MRILIVEDAPMLGDGLRRGLQLLDYAVDWFSTGTEADHALGVVHYDAVVLDLGLPGEDGMSLLARWRARGSRIPVIVLTA
RDAIDSRIGGLDAGADDYLVKPIALDELAARLRAVTRRAAGLSSPVWKHGALEFHPAARQAYWQGKPLELTSREAMLLEL
LLAHPNRLLTRDFLRDKLYDWQGGVESNALEVHIHHLRRKIHPKIVRTFRGAGYTLGAAEDCT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-27 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
h16_A1427 YP_725930.1 response regulator BAC0487 Protein 5e-34 45
h16_A1427 YP_725930.1 response regulator BAC0083 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
h16_A1427 YP_725930.1 response regulator VFG0473 Protein 3e-35 46