Gene Information

Name : Tery_0543 (Tery_0543)
Accession : YP_720466.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 855972 - 858584 bp
Length : 2613 bp
Strand : -
Note : PFAM: AAA ATPase, central region Clp, N terminal ATPase associated with various cellular activities, AAA_5 ATPase AAA-2; SMART: ATPase; KEGG: ava:Ava_2335 ATPase

DNA sequence :
ATGCAGCCAAATAATCCTAACCAATTTACAGAAAAAGCTTGGGAGGCAATATCCCGTACCCCTGACATTGCTAAAACTTC
TCAAAATCAACAAATTGAAGCTGAACACCTAATGAAAGCTTTGTTAGAACAAAATGGACTGGTAGCTAGTCTATTTAGCA
AAGTAGGTGTTTCAACTACCAAAATACAAGAATACACAGATTCATTTATTAAGCGTCAACCCAAAGTCAAAAATATACCC
AATAATATTTACTTAGGTCGTAGTCTAGATGCCTTATTAGATAATGCCGAAAAATATCGCCAGGAATACAAAGATGAATA
TATATCTATTGAACATCTGATACTCGCTTACCTGAAAGACGATCACTTTGGCAAAAATCTCTATAAAGAATTCAAATTGG
ATGAAGTAAAGCTCAAAAAAACAATTTCCCAAGTTAGAGGTAAGCAAAAAGTAACAGACAAAAATCCTGAAGGCAAATAT
GAAGCTCTGGAAAAATACGGTCGCGACCTGACAGAATTTGCTCGTGAAGGTAAACTTGACCCAGTTATTGGGCGTGACGA
CGAAATTCGACGTACTATTCAAATACTCAGTCGTCGTACTAAAAATAACCCAGTTTTAATAGGTGAACCTGGAGTCGGGA
AAACTGCGATAGCTGAAGGTCTAGCACAAAGGATCATCACTCTTGATGTTCCTCAGTCTCTAAAAGACCGTAAACTTATC
GCTCTAGATATGGGTGCCTTAATTGCGGGTGCTAAATTTAGGGGTGAATTTGAAGAACGTCTGAAAGCTGTTCTCAAAGA
AGTTACTGACTCAGAGGGCAAAATTATCTTATTTATAGATGAAATTCATACTGTTGTTGGAGCAGGTGCAACCCAAGGGG
CAATGGATGCAGGTAACTTGCTGAAACCTATGTTAGCTAGGGGGGAACTAAGGTGTATTGGGGCGACGACTCTTGATGAG
TATCGTAAATACATTGAAAAAGATGCTGCCTTAGAACGTCGTTTCCAACAAGTTTATGTCGATCAACCTAGTGTGGAAGA
TGCAATATCAATTTTACGGGGTCTCAAAGAACGCTATGAGGTACATCATGGTGTAAAAATTTCTGATAGTTCTTTAGTTG
CTGCTGCTACTTTATCTACTAGATATATTAGCGATCGCTTCCTCCCAGATAAGGCCATCGACTTGGTGGATGAAGCTGCT
GCTAAACTTAAAATGGAAATCACTTCTAAACCTGAGGAACTTGATGAAATTGACCGCAAAATTCTCCAACTAGAAATGGA
GAAGTTATCTTTGCAAAAGGAAAGTGATACTGCTTCTAAAGAAAGGTTAGGAAGGCTAGAAAAAGATTTAGCAAATTTAA
AAGAGGGGCAACGGGCTCTTAATGCTCAGTGGGAATCAGAAAAAGGTATCATTAGTACAATTCAGACTGTCAAGGAAGAA
ATTGATAAAGTTAATATTGAGATTCAGCAAGCAGAACGAAATTATGACCTTAACCGTGCTGCTGAGTTGAAATATGGTAG
ACTGATTAATTTACAGAAACAGGTGGAGGAAGCAGAGGCTAAACTGGCAACAACTCAAACTAGTGGTCAGACTTTGTTAC
GAGAAGAGGTGACAGAAGCTGATATTGCTGAGATTATTTCTAAGTGGACTGGTATTCCTATCAGTAAATTAGTAGAGTCA
GAAAAAGAAAAACTGCTACATCTTGAAGGGGAGTTGCATAAGCGAGTTATTGGGCAGAATGAAGCTGTGAGTGCTGTTTC
TGATGCTATTCAGCGATCGCGTGCAGGTTTGGCTGACCCGAACCGTCCAGTTGCTAGTTTTATTTTCCTGGGTCCGACTG
GTGTGGGTAAAACAGAGTTAGGAAAGGCATTGGCAGCATATTTATTTGACACTGAAGATGCGATGGTGCGTATAGATATG
TCTGAGTATATGGAGAAACATTCTGTGTCTCGTTTAATTGGGGCACCTCCTGGATATGTGGGTTATGATGAAGGTGGTCA
GTTAACTGAAGCTATTCGCCGTCGCCCATATACGGTGATTTTGTTTGATGAAATTGAAAAAGCACATCCGGATGTGTTTA
ATATTATGCTGCAAATTTTGGATGATGGGCGGGTTACTGATAGTCAAGGTCACAAGGTTGATTTTAAGAATAGTGTGATT
ATTATGACAAGTAATATTGGTTCTCAGTATATTTTAGATGTTACTGATGATTATGAGCAAATGCAGGGTCGGGTAATGGA
GGCGTTGCGTGCTGCTTTCCGCCCAGAATTTCTCAACCGTATTGATGAGACGATTATTTTTCATGGGTTGCAGAAAGAGC
AGTTACGAGAAATTGTGCAGTTGCAGGTTGTGCGTTTAGAGAAAAGGTTGGCTGAACGTAAGATGTCATTGAAGCTTACT
GATGCTGCTATTAATTTTTTGGCAGATGTTGGGTATGATCCGGTGTATGGGGCTCGACCTTTAAAGCGGGCAATTCAGCG
AGAGTTGGAAACGCAAATTGCTAAAAGTATTTTGCGTAGTGAATTTAATGATGGTGATACTATTTTTGTAGATATTGAAA
ATGAGCGACTTTCGTTGAAACGGTTGCCTATGGAGTTGGTGACAGCTAAATGA

Protein sequence :
MQPNNPNQFTEKAWEAISRTPDIAKTSQNQQIEAEHLMKALLEQNGLVASLFSKVGVSTTKIQEYTDSFIKRQPKVKNIP
NNIYLGRSLDALLDNAEKYRQEYKDEYISIEHLILAYLKDDHFGKNLYKEFKLDEVKLKKTISQVRGKQKVTDKNPEGKY
EALEKYGRDLTEFAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIITLDVPQSLKDRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVEDAISILRGLKERYEVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDTASKERLGRLEKDLANLKEGQRALNAQWESEKGIISTIQTVKEE
IDKVNIEIQQAERNYDLNRAAELKYGRLINLQKQVEEAEAKLATTQTSGQTLLREEVTEADIAEIISKWTGIPISKLVES
EKEKLLHLEGELHKRVIGQNEAVSAVSDAIQRSRAGLADPNRPVASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDM
SEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAIRRRPYTVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGHKVDFKNSVI
IMTSNIGSQYILDVTDDYEQMQGRVMEALRAAFRPEFLNRIDETIIFHGLQKEQLREIVQLQVVRLEKRLAERKMSLKLT
DAAINFLADVGYDPVYGARPLKRAIQRELETQIAKSILRSEFNDGDTIFVDIENERLSLKRLPMELVTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-103 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_0543 YP_720466.1 ATPase VFG2076 Protein 1e-115 43
Tery_0543 YP_720466.1 ATPase VFG2084 Protein 5e-108 43