Gene Information

Name : hemC (Tery_4621)
Accession : YP_724067.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 7100809 - 7101771 bp
Length : 963 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGACAATATCTGCCTCTACTCCTACCATTCGGATCGGTTCACGCAAAAGTCAACTCGCCTTAATTCAAACCTACTGGGT
CCAAGAAAAACTTGAAAAAAATTTCCCAAATATTACATTTGAAGTCCACAAAATGTCTACCCAAGGAGATAAAATTCTAG
ATGTAGCTTTAGCAAAAATAGGAGATAAAGGGCTTTTTACTAAAGAACTAGAATTAGGAATGCTGCAAAATGAAACTGAC
CTAGCAGTTCATTCCTTAAAAGACTTACCCACAAACTTACCAGAAGGTCTAATTCTCGGTTGCGTCACCGAACGGGAAAA
CCCTGCAGATGCTTTAGTCCTCCATGAAAAATTAAAAGATAAACAACTTGAGACTTTACCAGAAGGTGCTGTCATTGGTA
CCTCTTCCCTAAGACGTTTAGCACAACTGCGCTACCACTTCCCTCACTTAGAATTTAAAGATGTTCGTGGTAACCTGAAT
ACTAGACTAGCAAAATTAGATGCTGGTGAGTATGATGCTCTAATATTGGCTTTTGCTGGTTTGCATAGGTTGGGGATGAG
CGATCGCATTCATCAAATTATACCTCCAGAAATTTCTCTTCATGCCGTTGGACAAGGTGCTTTAGGAATAGAATGTCGTG
CCGGAGATAATAATATTCTCAATTTATTGAAAAGTCTGGAACATACTGCCACTGCTCAGAGATGTTATGCCGAACGTGCT
TTTCTGAGAGAATTAGAAGGAGGCTGTCAAGTTCCCATTGGTGTTAACACCCAAATAGAAGGAGAACAACTAACTTTAAC
TGGTTTAGTCGCTAGTTTAGATGGTAAGAAATTAGTTAAGGATATTGTAACTGGAGCCACTGCTGATGCAGAACAAATAG
GCATCGAATTAGCTCAAAAACTAAGAAAACAAGGCGCCCAAGAAATCTTAGATCAAATTTTAGCAGAAATTAACCGTAGT
TAA

Protein sequence :
MTISASTPTIRIGSRKSQLALIQTYWVQEKLEKNFPNITFEVHKMSTQGDKILDVALAKIGDKGLFTKELELGMLQNETD
LAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQLETLPEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLN
TRLAKLDAGEYDALILAFAGLHRLGMSDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERA
FLRELEGGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLRKQGAQEILDQILAEINRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-61 50
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-61 50