Gene Information

Name : Tery_0450 (Tery_0450)
Accession : YP_720382.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 711457 - 713475 bp
Length : 2019 bp
Strand : -
Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo

DNA sequence :
ATGGCTGTTGCAACTCAATCACTTGAAGAACTTTGCATTAACTCTATTCGCTTTTTAGCAATTGATGCAGTCCAAAAAGC
TAATTCTGGCCATCCAGGACTACCAATGGGTGCGGCACCAATGGCCTTTGTCCTTTGGGATAAGTTGATGCGGTTTAACC
CCAAAAATCCTAAATGGTTAAATCGCGATCGCTTTGTTCTCTCTGCTGGCCACGGCTGTATGTTACAGTATGCTTTGATG
CACTTGACTGGTTATGACAGTGTACCTATAGAGGAAATTAAACAATTCCGTCAGTGGAATTCTAAAACTCCTGGCCATCC
AGAAAATCATATTACTGAAGGTATTGAAGTTACTACTGGGCCACTAGGACAAGGTATTGCTAATGCTGTAGGATTAGCTG
CAGCTGAAGCTCATTTAGCTGCTGTATTTAATAAGCCAGATTGTAATCTCATTGACCATTATACTTATGTAATTGTGGGT
GATGGTTGTAATATGGAGGGGATTTCTGGTGAAGCTTGCTCCCTTGCCGGACACTGGGGTTTAGGTAAGTTAATTGCTTT
CTATGATGATAACCATATCTCTATTGATGGTCACACTGATATTTCTTTTACTGAAGATGTAGGTAAACGTTTTGAAGCTT
ATGGTTGGCACGTTCAGCACGTTAGCGATGGTAATACTAATTTAGAAGCGATCGCTGAAGCTATTGAAAAAGCAAAAGCA
GTTACTGACAAACCTTCCCTAATTAAAGTTACTACTATTATTGGTTACGGTTCTCCTAATAAAGCTGATACTCACGATGT
ACATGGTGCGGCACTAGGTCCTGATGAGGTGGCAGCAACTCGGAAACATCTTGGTTGGGAATATCCAGAGTTTGAGGTTC
CACCAGATGCTCTCAGTCACTTCCGCAAAGCAGTTGAGCGAGGAGCTAAATATGAGGAAGAATGGAATCAATTATTCTCT
GAGTATAAGTCTAAGTATCCTGAAGATGCAGCTACTTTAGAACGGATGGTAAGTGGTAAACTACCTGAAGGTTGGGCGGA
TGCACTACCTAAATATACTCCTGAAAGTAAGAAAGATGCTACTCGTAACCAGTCTGGTGCAACACTCAACGCAATAGCTG
GAGTTTTACCAGAATTAATTGGTGGTTCTGCTGACTTGGCTCCTTCTAACAAAACTTTACTCAAGGGTTTAGGAGATTTT
CAAAAAGGTCAATACCAAAACCGAAATGTGCGCTTTGGGGTTCGGGAACATGGAATGGGAGCAATTTGTAACGGTATTGC
TCTACACGGTTCTGGGTTAATTTCTTATGGTGCAACTTTCTTGGTGTTTACTGACTATATGCGGAACTCTATCCGTTTAT
CTGCTTTAGCTGAAGCTGGTGTTATTTGGGTAATGACTCACGACTCCATCGCTTTGGGTGAAGACGGACCGACTCACCAA
CCAGTTGAACATATTGCATCCTTACGTTTGATTCCACAACTGATAGTTATTCGTCCAGCAGATGGTAATGAAACTTCTGG
GGCTTATAAGATTGCAGTAGAAAAAGCTAAAGCAAGTCATCCTCAACCGACTCTGTTAGCATTATCTCGTCAAGGTTTAC
CTAATTTAGCTGGTAGTTCTATTGATGCGGTTGCTAAAGGTGCTTATGTGCTTAGTGACAGCGAGGGTACTCCTGACATT
ATTCTTATTGGTACTGGTGGTGAAACTTACCAATGTGTGGAAGCTGGTGAAAAACTTCGTGCTGAAGGTAAGAAGGTTCG
GGTAGTTTCTATGCCATGTTGGGAATTATTTGAAGAGCAGGATGCAGCTTATAAGGAGTCTGTGTTCCCTGCGTCTGTGA
AGAAGCGTTTGGCAGTGGAAGCAGGTGTTAGTTTTGGTTGGCATCGTTATGTGACTGATGAAGGTGCGACTTTGAGTGTT
GATACTTTTGGTGCTTCTGCTCCTGGCGGTGTGGTACTGGAAAAGTTTGGATTTACTGTTGATAACATTGTAGCTAAGGC
TAAGGCATTGTTGGGTTAA

Protein sequence :
MAVATQSLEELCINSIRFLAIDAVQKANSGHPGLPMGAAPMAFVLWDKLMRFNPKNPKWLNRDRFVLSAGHGCMLQYALM
HLTGYDSVPIEEIKQFRQWNSKTPGHPENHITEGIEVTTGPLGQGIANAVGLAAAEAHLAAVFNKPDCNLIDHYTYVIVG
DGCNMEGISGEACSLAGHWGLGKLIAFYDDNHISIDGHTDISFTEDVGKRFEAYGWHVQHVSDGNTNLEAIAEAIEKAKA
VTDKPSLIKVTTIIGYGSPNKADTHDVHGAALGPDEVAATRKHLGWEYPEFEVPPDALSHFRKAVERGAKYEEEWNQLFS
EYKSKYPEDAATLERMVSGKLPEGWADALPKYTPESKKDATRNQSGATLNAIAGVLPELIGGSADLAPSNKTLLKGLGDF
QKGQYQNRNVRFGVREHGMGAICNGIALHGSGLISYGATFLVFTDYMRNSIRLSALAEAGVIWVMTHDSIALGEDGPTHQ
PVEHIASLRLIPQLIVIRPADGNETSGAYKIAVEKAKASHPQPTLLALSRQGLPNLAGSSIDAVAKGAYVLSDSEGTPDI
ILIGTGGETYQCVEAGEKLRAEGKKVRVVSMPCWELFEEQDAAYKESVFPASVKKRLAVEAGVSFGWHRYVTDEGATLSV
DTFGASAPGGVVLEKFGFTVDNIVAKAKALLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 9e-147 53
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-149 53