Gene Information

Name : Tery_3358 (Tery_3358)
Accession : YP_722933.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 5152432 - 5153325 bp
Length : 894 bp
Strand : -
Note : PFAM: transport system permease protein ABC-3; KEGG: ava:Ava_1599 ABC-3

DNA sequence :
ATGTTAGAAAAATTAGTTGAACCATTACAATATAGTTTTATGCAGCGATCGCTCCTAGTAGCAATAATAGTTGGAATTAT
TTGTGCAGTAGTAGGCAGTTATTTAATGGTACAAAGATTAGCTCTACTAGGAGATGCAATTAGTCACTCAGTACTACCAG
GATTAGCCATTGCTTTTTGGGTTGGAGCAAATATATTTATCGGGGCATTTATAGCCGGCATAATTAGCACAATTTTAATC
AATCTAATTAGAACGCGATCGTCAATCAAAGAAGACGCAGCAATGGGCATAGTTTTTTCAGCCTTCTTTGCTTTAGGAAT
AACACTAATGACAATTATTCAGAAAGACAATAAAATCGACCTCAATCATTTTTTATTCGGTAATATTCTAGGCGTAACCG
TTGGAGACGTCCGCGATACACTAATTATTGGTATAATTGTTTTATTAGTTGTAATCTTACTTTATAAAGAACTATTATTT
TATACATTTGATCCCCTCGGCGCTCAAGCAGTAGGTTTACCTGTAAACTTATTAAACCTAGGGCTAATGATGTTAATTGG
TTTAACAATTGTAGCAAGTCTTAAAGCAGTAGGAGTAGTATTAGTTTTATCCTTATTAATCACACCAGCATCTACAGCTT
ATCTATTAGTCAAAAGACTTCACCAAGTAATCATATTAGGAGTAGGAATAGGAACTTTATCTAGTATTAGTGGGATGTAT
ATTAGCTATTTCTATAACTTGCCATCTGGTCCAGCAATTGTATTAGTATCATTTGGGTTATTTATACTAGCTTTTTTGTT
CAGCCCCACTCAGGGAATTTTCACTCATCCCCCATCAATTTCTAGTCAGCCCTCTATCTGGCGGGAGTTAAAAAGTTTAA
TTAAGTCAAATTAA

Protein sequence :
MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFWVGANIFIGAFIAGIISTILI
NLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKIDLNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLF
YTFDPLGAQAVGLPVNLLNLGLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY
ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 8e-34 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 6e-34 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-29 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-30 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-30 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 6e-30 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 5e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_3358 YP_722933.1 hypothetical protein BAC0352 Protein 3e-30 42
Tery_3358 YP_722933.1 hypothetical protein BAC0442 Protein 8e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_3358 YP_722933.1 hypothetical protein VFG0528 Protein 3e-30 42