Gene Information

Name : Tery_2267 (Tery_2267)
Accession : YP_721968.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3528353 - 3529612 bp
Length : 1260 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase family protein

DNA sequence :
ATGCAGAACATTAAAATAGCTGTGATTGGTTTAGGATATGTTGGTTTACCCCTTGCGGTTGAATTTGCTCAAAAGTTTCC
AACCCTTGGGTTTGACATTTCACAAACGCGAGTTGAACAACTGAATCAAGGATTTGATAGCACCCTCGAAGTTGACAACG
ATTATTTAGCTTCAGTTATATCTGAAACAGGATTTCGCGTCACCACCTCTATTGAGGATATTGCTAATTGCAATATTTAT
ATTGTAACTGTACCAACTCCGATTGACCGACACAAACAACCAAATTTAGTTCCTTTAATTCAAGCCAGCGAAGCAGTTGG
TAAAATTCTTAAAAAGGATGATATAGTCATTTATGAATCTACTGTTTATCCGGGCACAACAGAGGAAGAATGCGTTCCTG
TGTTAGAAAAGATTTCAGGTTTAAAATTTAACCAAGACTTTTTCTGTGGTTACTCCCCTGAGCGCATTAATCCTGGTGAC
AAGATACACACAGTTACCAAAGTTAAAAAAGTCACTTCAGGTTCGACGCCTGAAATAGCTCAAAAAGTTGATGCACTCTA
TAATACGATTGTCATAGCTGGAACCCATTTAGCATCTTCTATAAGAGTTGCTGAGGCAGCTAAAGTAATTGAAAACTCTC
AACGAGATATTAATATTGCTTTTGTCAATGAGTTGGCGATTATTTTTAATAAAATGGGGATCAAAACTAGGGAAGTGTTA
GAGGCAGCCGCTACTAAATGGAATTTCTTGCCTTTTCAACCAGGACTGGTGGGGGGACACTGTATCGGAGTAGATCCATA
CTATTTAACGTACAAGGCCCAGGAACTAGGCTATCACCCAGAAATTATTCTTGCAGGACGACGCCTCAATGATAATATGG
GAATTTATGTTGCTAAGCAGGTTGTTAAGCTCGCGATTAAAAAGGGGCAAAAAGTTGAGGGTGCTGCTGTTCTAATTTTG
GGTATTACTTTTAAGGAAAATTGTTCGGATATTCGTAATTCTAAAGTAATAGATTTAATTCGTGAATTAGAAGATTTTGG
TTGTGTTGTAGATGTTTATGACCCTTGGGCATTGCCAGAGGAGGTTAAGCAGGAGCATGATATTGATATTTTAAGCGATC
TACCAAAACTTGCTAGCTATCAGGCAATTGTACTGGCTGTTGCCCACGATGAATTTAAACAGCTTCCTTTGGCTAAGAAT
GACGGGCAAGTTATTTTTGACGTCAAGTCCTTTTTGCCCTCGGCGGATGCAACGCTTTAG

Protein sequence :
MQNIKIAVIGLGYVGLPLAVEFAQKFPTLGFDISQTRVEQLNQGFDSTLEVDNDYLASVISETGFRVTTSIEDIANCNIY
IVTVPTPIDRHKQPNLVPLIQASEAVGKILKKDDIVIYESTVYPGTTEEECVPVLEKISGLKFNQDFFCGYSPERINPGD
KIHTVTKVKKVTSGSTPEIAQKVDALYNTIVIAGTHLASSIRVAEAAKVIENSQRDINIAFVNELAIIFNKMGIKTREVL
EAAATKWNFLPFQPGLVGGHCIGVDPYYLTYKAQELGYHPEIILAGRRLNDNMGIYVAKQVVKLAIKKGQKVEGAAVLIL
GITFKENCSDIRNSKVIDLIRELEDFGCVVDVYDPWALPEEVKQEHDIDILSDLPKLASYQAIVLAVAHDEFKQLPLAKN
DGQVIFDVKSFLPSADATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 7e-117 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 7e-117 57
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-101 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_2267 YP_721968.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 3e-117 57