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Name : mutS (HS_0005) Accession : YP_718210.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 5598 - 8168 bp Length : 2571 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGCACACATTCGAAAATCACACGCCAATGATGAAACAATATTTAAAAATAAAAGCGGAAAATCCGGATGTTTTGTTGTT TTATCGCATGGGTGATTTTTATGAGCTTTTTTATGATGATGCAAAAAAAGCTGCTGAATTATTAGATATTTCCCTAACTA AAAGAGGGCAATCAGCTGGACAACCGGTTCCAATGGCTGGCGTACCTTATCATGCAATAGAAGGATATTTAGCAAAATTG GTACACCTTGGGGAAAGTGTAGCAATTTGTGAGCAAGTTGGTGAGCCTGTTATAGCTAAAGGTCCGGTTGAACGCCAAGT TGTACGTATTGTTACACCGGGAACAGTGAGTGATGAAGCATTGTTACCGGAAAAGCAAGACAATCTTATCGCTACGATTT ATCAAGAAAAAACACAATTTGGCTTAGCTGTTTTAGATATGACTTCAGGGTGTTTTCAAATTAGCGAACTACAAGATGCC GCCAGTTTACAAGCTGAGTTACAACGTATTCAACCGGTTGAATTACTATATTCGGAAGCGTTAGAGGATAAACATTTAAT TGAACAATTCAAAGGATTACGTCGTCGTCCTCTTTGGGAGTTTGAATTAAGTACGGCAATTCAATTACTTAATCGCCAAT TCGGTACAAAAGATTTGCGTGGTTTTGGTGTAGAAAAAGCGGTTTTAGGATTATGTGCTGCGGGTTGTTTGTTGCAATAT GCAAAAGAAACGCAACGTACCGCACTTCCTCATATTCAAAGTATTAGCTTGTTACAAAATAGCGATACTGTACAAATTGA TGCGTCAACACGTAGAAATTTAGAACTAACCCAAAATCTTGCTGGCGGAACTGAAAATACACTTGCTGCAATTTTAGATA AATGTGTTACCCCGATGGGAAGTCGCTTACTCAAACGTTGGATTCACCAGCCTATTCGCAATATTGAAAAATTGCAGTGT CGTCAACAACATATTCAAATGCTGTTGCAGCAAAATTTAGTTGAAGAATTACAACCTCTTTTACGTCAAGTTGGCGATAT GGAGCGTATTCTTGCTCGGGTTGCCCTGCGTTCCGCTCGACCTCGAGATTTAACTCGGCTACGAACAGCGTTGGAACAAA TACCTTTTATTCAACACCAATTAACAAAAATACCGCACTTTGTTGCATTTTCACAACAAATTGCTGATTTTTCTGTGCAA TTAGCACTTTTGCAGCGAGCGATTATTGATAATCCCCCCTTACTTATTCGTGATGGCGGTGTCATTGCTGAAGGTTACAA CGAGGAGCTTGATGAATGGCGGAGTTTGTCTGAAGGAGCAACACGCTACTTAAAGGATTTGGAGCAACGTGAGCGTGCAA ATACCGGTATTGATACATTAAAAATCGGTTTTAATGCGGTGCATGGTTATTATATTCAAATCAGTCAAGGGCAAGCACAT AAAGCACCGCTTCATTATGTACGTCGCCAAACATTGAAAAATGCAGAACGTTATATTATTCCTGAACTAAAAACCTATGA AGAAAAAGTTCTAAAAGCAAAAGGAGCGTCACTTGCGTTAGAAAAACAACTTTATGATGAAATTTTCGATCAATTATTAC CGCACTTAGGTGATTTACAACTAGCCAGTTTAACTTTGGCAGAACTTGATGTTTTAACCAATTTAGCGGAACGGGCAGAA ACCTTAAATTATGTTCAACCACAATTTAGTACGCAAATCGGTTTGCAAATAATGCAGGGGCGTCATCCGGTTGTAGAGCA AGTATTAAAAGATCCCTTTATTGCTAATCCCGTAGAACTTAATCAAAAGCGTCATTTGTTGATTATTACGGGACCGAATA TGGGGGGTAAAAGTACTTATATGCGACAAACGGCACTGATTACTTTGATGGCATATATTGGCAGTTTTGTACCTGCAGAA AGTGCGGTGATTGGACCTATTGATCGAATTTTTACACGTATTGGTGCCTCTGACGATCTTGCTTCCGGACGTTCAACTTT TATGGTTGAAATGACTGAAATGGCAAATATTTTGCATCAAGCGACGGAGCAAAGTTTGGTGCTTATTGATGAAATTGGGC GAGGAACGTCAACCTATGATGGACTTTCTCTTGCTTGGGCTTGTGCTGAACAATTGGCTCAAAAAATTCGTAGTTTAACT TTATTTGCTACTCATTACTTTGAACTGACGGTTTTACCGGAAAAAATTGACGGTATCCATAATGTTCATCTTGATGCCAT TGAGCATAATGACAATATTGCATTTATGCATTCGATACAAGAAGGCGCGGCAAGTAAAAGTTATGGTTTGGCTGTTGCTG CTTTAGCCGGTGTCCCACAAAATGTCATTAAATCGGCAAAACAGAAATTAAAACAGCTTGAAACACTTTCTCAGCAAAAC AGTTGCCAATCACAGTCCGTTTTGACACAAGTTCAAGGGGAATTAACTTTAATGGAAGAGGAGGAGAATACAAGTGCGGT GATTGAAACGCTAAAAACGCTTGATCCTAATGAGTTAAGTCCGAAGCAAGCACTTGAGTGTTTATATCAGTTAAAGAAAA TGTTGAATTAA Protein sequence : MHTFENHTPMMKQYLKIKAENPDVLLFYRMGDFYELFYDDAKKAAELLDISLTKRGQSAGQPVPMAGVPYHAIEGYLAKL VHLGESVAICEQVGEPVIAKGPVERQVVRIVTPGTVSDEALLPEKQDNLIATIYQEKTQFGLAVLDMTSGCFQISELQDA ASLQAELQRIQPVELLYSEALEDKHLIEQFKGLRRRPLWEFELSTAIQLLNRQFGTKDLRGFGVEKAVLGLCAAGCLLQY AKETQRTALPHIQSISLLQNSDTVQIDASTRRNLELTQNLAGGTENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEKLQC RQQHIQMLLQQNLVEELQPLLRQVGDMERILARVALRSARPRDLTRLRTALEQIPFIQHQLTKIPHFVAFSQQIADFSVQ LALLQRAIIDNPPLLIRDGGVIAEGYNEELDEWRSLSEGATRYLKDLEQRERANTGIDTLKIGFNAVHGYYIQISQGQAH KAPLHYVRRQTLKNAERYIIPELKTYEEKVLKAKGASLALEKQLYDEIFDQLLPHLGDLQLASLTLAELDVLTNLAERAE TLNYVQPQFSTQIGLQIMQGRHPVVEQVLKDPFIANPVELNQKRHLLIITGPNMGGKSTYMRQTALITLMAYIGSFVPAE SAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWACAEQLAQKIRSLT LFATHYFELTVLPEKIDGIHNVHLDAIEHNDNIAFMHSIQEGAASKSYGLAVAALAGVPQNVIKSAKQKLKQLETLSQQN SCQSQSVLTQVQGELTLMEEEENTSAVIETLKTLDPNELSPKQALECLYQLKKMLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_718210.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 68 |
